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Protein Alignment crb and Gas6

DIOPT Version :9

Sequence 1:	NP_001247284.1	Gene:	crb / 42896	FlyBaseID:	FBgn0259685	Length:	2253	Species:	Drosophila melanogaster
Sequence 2:	NP_476441.2	Gene:	Gas6 / 58935	RGDID:	61913	Length:	674	Species:	Rattus norvegicus

Alignment Length:	730	Identity:	163/730 - (22%)
Similarity:	268/730 - (36%)	Gaps:	215/730 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   904 CELNI-DECLSNPC-TNGAK-CLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSN 965
            |..|: |:|..||| ..|.: |.|.:.::||.|.:|:.|:.|::|:|||.    |.||.|.:..:
  Rat   109 CVKNLPDQCTPNPCDKKGTQLCQDLMGNFFCLCKDGWGGRLCDKDVNECS----QKNGGCSQVCH 169

  Fly   966 ITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGII----GKNCEININEC-DSNPCSKHGNCN 1025
                            ::|.||      :|.|..|..    .|:|: :|:|| ||:.|. ...|.
  Rat   170 ----------------NKPGSF------QCACHSGFSLQSDNKSCQ-DIDECTDSDTCG-DARCK 210

  Fly  1026 DGIGTYTCECEPGF-----EGTHCEINIDECDRYNPCQRGTCYDQIDDYDCDCDANYGGKNCSVL 1085
            :..|:|:|.|:.|:     |.| |: ::|||.: :.|:: ||.:....|.|.|:.. ||...|.
  Rat   211 NLPGSYSCLCDKGYTYSSKEKT-CQ-DVDECQQ-DRCEQ-TCVNSPGSYTCHCNGR-GGLKLSP- 269

  Fly  1086 LKGCDQNPCLNGGACLPY-LINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGY 1149
                |.:.|.:...|:|: :...|..||   ....|.|....:.....:..|.|::
  Rat   270 ----DMDTCEDILPCVPFSMAKSVKSLY---LGRMFSGTPVIRLRFKRLQPTRLLA--------- 318

  Fly  1150 DINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGV----FIGSKLNDSN 1210
              ...|||..|.|||.|  .|.:::....:|....|||.|..    ::.||    ..|..:|...
  Rat   319 --EFDFRTFDPEGVLFF--AGGRSDSTWIVLGFRAGRLELQL----RYNGVGRITSSGPTINHGM 375

  Fly  1211 WHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNLKSYLRHLT------ 1269
            |..:.|.....:||:..| :.|:..:.                :.|.:..|:..|.||.
  Rat   376 WQTISVEELDRNLVIKVN-KDAVMKIA----------------VAGGLFQLERGLYHLNLTVGGI 423

  Fly  1270 -HQPSAFV--------GCMQDIMVNGKWIFPDEQDANISYTKLENVQSGC-PRTEQCKPNPCHSN 1324
             .:.|..|        |||:      .|.:.:.:|:.|..|...|.:..| ..||:....|  .|
  Rat   424 PFKESDLVQPINPRLDGCMR------SWNWLNGEDSAIQETVKANTKMQCFSVTERGSFFP--GN 480

  Fly  1325 GECTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIR 1389
            |                |..::..:..|:...|.|.|.      |...|||            ||
  Rat   481 G----------------FAFYSLNYTRTSLDVGTETTW------EVEVVAR------------IR 511

  Fly  1390 TREPTGQVFYLGTDPRKAPTKNIGD------SYVAAKLHGGELLVKMQFSGTPE--AYTVGGQKL 1446
            ....||.:..|           :||      |......|..:.|.|.......|  |..:...|:
  Rat   512 PATDTGVLMAL-----------VGDKDVVLLSVALVDYHSTKKLKKQLVVLAVENVALALMEIKV 565

  Fly  1447 DNGYNHLIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIP 1511
            .:...|.:.|........::::||: .:..:||..|.:            |..||....:..::.
  Rat   566 CDSQEHTVTVSLRDGEATLEVDGTK-GQSEVSTAQLQE------------RLDLLKTRLQGSVLT 617

  Fly  1512 VPGAGIP-IEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTI 1575
            ..| |:| ::.|:.|..|     :::|.:                      .::||.|.|   .:
  Rat   618 FVG-GLPDVQVTSTPVTA-----FYRGCM----------------------TLEVNGKTL---DL 651

  Fly  1576 DRASVLPGEVSDDLC 1590
            |.||....:::...|
  Rat   652 DTASYKHSDITSHSC 666

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.