Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571624.2 | Gene: | notch3 / 58066 | ZFINID: | ZDB-GENE-000329-5 | Length: | 2468 | Species: | Danio rerio |
Alignment Length: | 2005 | Identity: | 497/2005 - (24%) |
---|---|---|---|
Similarity: | 660/2005 - (32%) | Gaps: | 844/2005 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 312 PCENGGSCLENSRGDYQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGAC--VVIGGSGALTCEC 374
Fly 375 PKGYAGARCEVDTDECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECDK-NPCLNGG 438
Fly 439 RCFDTYGWYTCQCLDGWGGEICDRP-MTCQTQQCLNGGTCLDKPIG---FQCLCPPEYTGELCQI 499
Fly 500 APSCAQQCPIDS--ECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTL 562
Fly 563 TTTTKIPPITTSRTLVGTTTGSRRPPQQPLQSPTQRSASLNAC-PQEN-CLNGGTCLGYSGNYSC 625
Fly 626 ICASGYTGYNCQTSTGDGASALALTPINCNATNGKCLNGGTC--SMNGTHCYCAVGYSGDRCEKA 688
Fly 689 ENCSPLNCQEPMVCVQNQCLCPENKVCNQCATQPCQNGGECVDLP-NGDYECKCTRGWTGRTCGN 752
Fly 753 DVDECTLHPKICGN-GICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYEC 816
Fly 817 VCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGG 881
Fly 882 QCIDQLGGFRCDCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDI 946
Fly 947 NECESNPCQYNGNCLERSNITLYQMSRIT-------DLPKVFSQPFSF----ENASGYECVCVPG 1000
Fly 1001 IIGKNCEININECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQRGTCYDQ 1065
Fly 1066 IDDYDCDCDANYGGKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTT 1130
Fly 1131 LSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLN 1195
Fly 1196 KWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPN 1260
Fly 1261 LKSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNG 1325
Fly 1326 ECTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRT 1390
Fly 1391 REPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIE 1455
Fly 1456 VVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPVPGAGIPIE 1520
Fly 1521 DTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDRASVLPGEV 1585
Fly 1586 SDDLCRKNPCLHNAECRNT--WNDYTCKCPNGYKGKNC-QEIEFCQHVTCPGQSLCQNLDDGYEC 1647
Fly 1648 VTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRTRAGGTLLYIDNVDGFFEI 1712
Fly 1713 GVNGGRVTITWKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLEGGWKGWESMVDPTPAFSTD 1777
Fly 1778 IDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQFK-GCVGEARVGDLLLPYFSMAELYS 1841
Fly 1842 RTNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECL 1906
Fly 1907 NTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIASYVCDCPEDYMG 1971
Fly 1972 PQCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCDIP--FCEITP------- 2027
Fly 2028 ---CDNGGLCLTTGAVPMCKCSL--------------------------------------GYTG 2051
Fly 2052 RLCEQDINECESNPCQNGGQCKDLVGRYECDC------------------------------QGT 2086
Fly 2087 --------------GFEGIRCENDIDECNMEGDYCGGLGRCFNKPGSFQCICQKPYCGAYCNFTD 2137
Fly 2138 PCNATDLCSNGGRCVESCGAKPDYYCECPEGFAGKNCTAPITAKE----DGPSTT 2188 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 13/36 (36%) | ||
EGF_CA | 425..460 | CDD:238011 | 17/35 (49%) | ||
EGF | 466..495 | CDD:278437 | 13/31 (42%) | ||
EGF | 605..633 | CDD:278437 | 13/29 (45%) | ||
EGF_CA | 716..750 | CDD:238011 | 11/34 (32%) | ||
EGF_CA | 753..789 | CDD:238011 | 15/36 (42%) | ||
EGF_CA | 792..828 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 830..865 | CDD:238011 | 21/34 (62%) | ||
EGF_CA | 868..905 | CDD:238011 | 17/36 (47%) | ||
EGF_CA | 907..943 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 16/34 (47%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 3/134 (2%) | ||
EGF | 1316..1346 | CDD:278437 | 11/29 (38%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 5/161 (3%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 12/31 (39%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 8/136 (6%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 24/80 (30%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 10/36 (28%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 14/37 (38%) | ||
notch3 | NP_571624.2 | EGF_CA | 97..131 | CDD:238011 | 13/34 (38%) |
EGF_CA | 134..171 | CDD:238011 | 17/36 (47%) | ||
EGF_CA | 212..247 | CDD:238011 | 9/67 (13%) | ||
EGF_CA | 250..287 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 290..325 | CDD:238011 | 14/58 (24%) | ||
EGF_CA | 367..405 | CDD:238011 | 15/37 (41%) | ||
EGF_CA | 407..443 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 445..481 | CDD:238011 | 21/35 (60%) | ||
EGF_CA | 483..519 | CDD:238011 | 17/36 (47%) | ||
EGF_CA | 521..556 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 560..594 | CDD:238011 | 13/33 (39%) | ||
EGF_CA | 596..631 | CDD:238011 | 10/34 (29%) | ||
EGF_CA | 634..668 | CDD:238011 | 14/33 (42%) | ||
EGF_CA | 672..705 | CDD:238011 | 16/33 (48%) | ||
EGF_CA | 708..744 | CDD:238011 | 12/40 (30%) | ||
EGF_CA | 746..781 | CDD:238011 | 13/129 (10%) | ||
EGF_CA | 824..860 | CDD:238011 | 10/48 (21%) | ||
EGF_CA | 862..897 | CDD:238011 | 15/165 (9%) | ||
EGF_CA | 902..936 | CDD:238011 | 15/54 (28%) | ||
EGF_CA | 938..974 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 977..1012 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | 1015..1050 | CDD:238011 | 13/39 (33%) | ||
EGF_CA | 1103..1137 | CDD:238011 | 3/33 (9%) | ||
EGF_CA | 1140..1175 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | <1193..1220 | CDD:238011 | 6/26 (23%) | ||
EGF_CA | 1222..1260 | CDD:238011 | 10/37 (27%) | ||
Notch | 1392..1423 | CDD:278494 | |||
Notch | 1429..1462 | CDD:278494 | |||
Notch | 1475..1502 | CDD:278494 | |||
NOD | 1508..1559 | CDD:284282 | |||
NODP | 1577..1634 | CDD:284987 | |||
ANKYR | <1784..1896 | CDD:223738 | |||
ANK | <1784..1895 | CDD:238125 | |||
ANK repeat | 1791..1839 | CDD:293786 | |||
ANK repeat | 1841..1872 | CDD:293786 | |||
Ank_5 | 1861..1916 | CDD:290568 | |||
ANK | 1869..1995 | CDD:238125 | |||
ANK repeat | 1875..1906 | CDD:293786 | |||
ANK repeat | 1908..1939 | CDD:293786 | |||
Ank_2 | 1913..2005 | CDD:289560 | |||
ANK | 1936..2057 | CDD:238125 | |||
ANK repeat | 1941..1972 | CDD:293786 | |||
ANK repeat | 1974..2005 | CDD:293786 | |||
Ank_2 | 1979..>2039 | CDD:289560 | |||
Amelogenin | 2232..2325 | CDD:197891 | |||
DUF3454 | 2384..2445 | CDD:288764 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11659 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.710 |