Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001108566.2 | Gene: | notch2 / 58065 | ZFINID: | ZDB-GENE-000329-4 | Length: | 2475 | Species: | Danio rerio |
Alignment Length: | 1989 | Identity: | 507/1989 - (25%) |
---|---|---|---|
Similarity: | 691/1989 - (34%) | Gaps: | 773/1989 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 255 CSDHDLFTRLPDNFCLNDPCMGHGTCSSSPEG-YECRCTARYSGKNCQKDNGSPCAKNPCENGGS 318
Fly 319 C---LENSRGDYQCFCDPNHSGQHCETEVN--IHPLCQTNPCLNNGACVVIGGSGALTCECPKGY 378
Fly 379 AGARCEVDTDECASQPCQNNGSCIDRIN-GFSCDCSGTGYTGAFCQTNVDEC-DKNPCLNGGRCF 441
Fly 442 DTYGWYTCQCLDGWGGEICDRP-MTCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQ 505
Fly 506 QCPIDSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPP 570
Fly 571 ITTSRTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYN 635
Fly 636 CQTSTGDGASALALTPINCNATNGKCLNGGTCS--MNGTHCYCAVGYSGDRC-EKAENCSPLNCQ 697
Fly 698 EPMVCVQN----QCLCPENK---VC---NQCATQPCQNGGECVDLP-NGDYECKCTRGWTGRTCG 751
Fly 752 NDVDECTLHPKICGN-GICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYE 815
Fly 816 CVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNG 880
Fly 881 GQCIDQLGGFRCDCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQD 945
Fly 946 INECESNPCQYNGNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEINI 1010
Fly 1011 NECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQR-GTCYDQIDDYDCDCD 1074
Fly 1075 ANYGGKNCSVLLKGCDQNPCLNGGACL----PYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVA 1135
Fly 1136 TSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGV 1200
Fly 1201 FIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNLKSYL 1265
Fly 1266 RHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGECTDL 1330
Fly 1331 WHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRTREPTG 1395
Fly 1396 QVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIEVVRNQ 1460
Fly 1461 TLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVP 1525
Fly 1526 KEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDRASVLPGEVSDDLC 1590
Fly 1591 RKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQEIEFCQHVTCPGQSLCQNLDDGYECVTNTTFTG 1655
Fly 1656 QERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRTRAGGTLLYIDNVDGFFEIGVNGGRVT 1720
Fly 1721 ITWKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLEGGWKGWESMVDPTPAFSTDIDQAAFQS 1785
Fly 1786 LIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGCVGEARVGDLLLPYFSMAELYSRTNVSVQQK 1850
Fly 1851 AQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECLNTECLNNGT 1915
Fly 1916 CINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIASYVCDCPEDYMGPQCDVLKQM 1980
Fly 1981 TCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCDIP------------FCEITPCDNGGL 2033
Fly 2034 CLTTGAVPMCKCSLGYTGRLCEQDINECESNPCQNGGQCKDLVGRYECDCQGTGFEGIRCENDID 2098
Fly 2099 ECNMEGDYCGGLGRCFNKPGSFQCICQKPYCGAYCNF-TDPCNATDL---CSNGGRCVESCGAKP 2159
Fly 2160 DYYCECPEGFAGKNCTAPITAKEDGPSTTDIAIIVIPVV 2198 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 14/37 (38%) | ||
EGF_CA | 425..460 | CDD:238011 | 15/35 (43%) | ||
EGF | 466..495 | CDD:278437 | 8/28 (29%) | ||
EGF | 605..633 | CDD:278437 | 10/27 (37%) | ||
EGF_CA | 716..750 | CDD:238011 | 12/34 (35%) | ||
EGF_CA | 753..789 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 792..828 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 830..865 | CDD:238011 | 16/34 (47%) | ||
EGF_CA | 868..905 | CDD:238011 | 15/36 (42%) | ||
EGF_CA | 907..943 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 14/35 (40%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 16/134 (12%) | ||
EGF | 1316..1346 | CDD:278437 | 12/29 (41%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 11/161 (7%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 13/28 (46%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 13/135 (10%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 14/34 (41%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 9/36 (25%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 18/40 (45%) | ||
notch2 | NP_001108566.2 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11659 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.710 |