Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001038627.1 | Gene: | crb2b / 568520 | ZFINID: | ZDB-GENE-060610-1 | Length: | 1458 | Species: | Danio rerio |
Alignment Length: | 1922 | Identity: | 573/1922 - (29%) |
---|---|---|---|
Similarity: | 816/1922 - (42%) | Gaps: | 534/1922 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 380 GARCEVDTDECASQPCQNNGSCIDRINGFSCDCSGTG--YTGAFCQTNVDECDKNPCLNGGRCFD 442
Fly 443 TYGWYTCQCLDGWGGEICDRPMTCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQQC 507
Fly 508 PIDSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPIT 572
Fly 573 TSRTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQ 637
Fly 638 TSTGDGASALALTPINCNATNGKCLNGGTCSMNGTHCYCAVGYSGDRCEKAENCSPLNCQEPMVC 702
Fly 703 VQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKICGNG 767
Fly 768 -ICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDI 831
Fly 832 DECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSG 896
Fly 897 TGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCL 961
Fly 962 ERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNCND 1026
Fly 1027 GIGTYTCECEPGFEGTHCEINIDECDRYNPCQ-RGTCYDQIDDYDCDC------DANYGGKNCSV 1084
Fly 1085 LLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISV----TTER 1145
Fly 1146 EEGY------DINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHS-----SLLNKWEG 1199
Fly 1200 VFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRT-YLGGTIPNLKS 1263
Fly 1264 YLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGECT 1328
Fly 1329 DLWHTFACHCPRPFFGHTCQHNMTAATFGHE-NTTHSAVIV---ETTDVARRAIRSILDISMFIR 1389
Fly 1390 TREPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEA--YTVGGQKLDNGYNH 1452
Fly 1453 LIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGG-PAPTRESLLGATTEPGIIPVPGAG 1516
Fly 1517 IPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDR--AS 1579
Fly 1580 VLPGEVSDDLCRKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQEIEFCQHVTCPGQSLCQNLDDG 1644
Fly 1645 YECVTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIA--FRTR-AGGTLLYIDNV 1706
Fly 1707 DGFFEIGVNGGRVTITWKLSALHFGESARFEKENT--DGEWSRIYLRAHNSKLEGGWKGWESMVD 1769
Fly 1770 PTPA-FSTDIDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGCVGEARVGDLLLPY 1833
Fly 1834 FSMAELYSRTNVSVQQKAQF-RLNA-TRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGD 1896
Fly 1897 DCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIASY 1961
Fly 1962 VCDCPEDYMGPQCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCDIPF---- 2022
Fly 2023 CEI-TPCDNGGLCLTTGAVPMCKCSLGYTGRLCEQDINECESNPCQNGGQCKDLVGRYECDCQGT 2086
Fly 2087 GFEGIRCENDIDECNMEGDYCGGLGRCFNKPGSFQCICQKPYCGAYCNFTDPCNATDLCSNGGRC 2151
Fly 2152 VESCGAKPDYYCECPEGFAGKNCTAPITAKEDGPSTTDIAIIVIPVVVVLLLIAGALLGTFLVMA 2216
Fly 2217 RNKRATRGTYSPSAQEYCNPRLEMDNVLKPPPEERLI 2253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 15/38 (39%) | ||
EGF_CA | 425..460 | CDD:238011 | 4/34 (12%) | ||
EGF | 466..495 | CDD:278437 | 0/28 (0%) | ||
EGF | 605..633 | CDD:278437 | 5/27 (19%) | ||
EGF_CA | 716..750 | CDD:238011 | 15/33 (45%) | ||
EGF_CA | 753..789 | CDD:238011 | 19/36 (53%) | ||
EGF_CA | 792..828 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 830..865 | CDD:238011 | 16/34 (47%) | ||
EGF_CA | 868..905 | CDD:238011 | 19/36 (53%) | ||
EGF_CA | 907..943 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 16/41 (39%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 44/140 (31%) | ||
EGF | 1316..1346 | CDD:278437 | 14/29 (48%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 34/164 (21%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 12/28 (43%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 35/139 (25%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 13/36 (36%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 0/36 (0%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 7/37 (19%) | ||
crb2b | NP_001038627.1 | EGF_CA | 108..144 | CDD:238011 | 13/45 (29%) |
EGF_CA | 152..183 | CDD:238011 | 14/31 (45%) | ||
EGF_CA | 185..221 | CDD:238011 | 20/37 (54%) | ||
EGF_CA | 223..259 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 261..297 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 299..335 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 338..374 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 434..470 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 474..>500 | CDD:214542 | 14/26 (54%) | ||
LamG | 590..715 | CDD:238058 | 44/140 (31%) | ||
EGF_CA | <743..771 | CDD:238011 | 13/27 (48%) | ||
LamG | 784..919 | CDD:238058 | 39/191 (20%) | ||
EGF | 957..987 | CDD:278437 | 12/29 (41%) | ||
Laminin_G_2 | 1044..1160 | CDD:280389 | 36/140 (26%) | ||
EGF | 1197..1227 | CDD:278437 | 14/29 (48%) | ||
EGF_CA | 1231..1265 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 1269..1303 | CDD:238011 | 13/38 (34%) | ||
EGF_CA | 1347..1383 | CDD:238011 | 21/119 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H134710 | |
Inparanoid | 1 | 1.050 | 776 | 1.000 | Inparanoid score | I515 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D111153at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003041 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3765 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.900 |