Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_064472.3 | Gene: | Notch3 / 56761 | RGDID: | 620761 | Length: | 2319 | Species: | Rattus norvegicus |
Alignment Length: | 2163 | Identity: | 529/2163 - (24%) |
---|---|---|---|
Similarity: | 711/2163 - (32%) | Gaps: | 842/2163 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 254 PCSDHDLFTRLPDNFCLNDPCMGHGTCSSSPEGYE--CRCTARYSGKNCQKDNGSPCAKNPCENG 316
Fly 317 GSCLEN---SRGDYQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGY 378
Fly 379 AGARCEVDTDEC-ASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRCFD 442
Fly 443 TYG-WYTCQCLDGWGGEICDRPM-TCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQ 505
Fly 506 QCPIDSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPP 570
Fly 571 ITTSRTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYN 635
Fly 636 CQTSTGDGASALALTPINCNATNGKCLNGGTC--SMNGTHCYCAVGYSGDRCEKAENCSPLNCQE 698
Fly 699 PMVCVQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKI 763
Fly 764 CGN-GICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENC 827
Fly 828 EVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRC 892
Fly 893 DCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYN 957
Fly 958 GNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHG 1022
Fly 1023 NCNDGIGTYTCECEPGFEGTHCEINIDECD----------------------------------- 1052
Fly 1053 --RYNPCQRGTCYDQIDDYDCDCDANYGGKNCSVLL--KGCDQNPCLNGGACLPYLINEVTHLYN 1113
Fly 1114 CTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGYDINLQFRT-TLPNGVLAFGTTGEKNEPVS 1177
Fly 1178 YILELINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETA 1242
Fly 1243 NNSQPSFPRTYLGGTIPNLKSYLRHLTHQPSAFVG--CMQDIMVNGKWIFPDEQDANISYTKLEN 1305
Fly 1306 VQSGCPRTEQCKPNPCHSNGECTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVET 1370
Fly 1371 TDVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGT 1435
Fly 1436 -PEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRES 1499
Fly 1500 LLGATTEPGIIPVPGAGIPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQ 1564
Fly 1565 VNAKPLGAVTIDRASVLPGEVSDDLCRKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQ-EIEFCQ 1628
Fly 1629 HVTCPGQSLCQNLDDGYECVTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFR 1693
Fly 1694 TRAGGTLLYIDNVDGFFEIGVNGGRVTITWKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLE 1758
Fly 1759 GGWKGWESMVDPTPAFSTDIDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGCVGE 1823
Fly 1824 ARVGDLLLPYFSMAELYSRTNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACT 1888
Fly 1889 CQPGFEGDDCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQP------ 1947
Fly 1948 -CHNGGNCTDLIASYVCDCPEDYMGPQC------------------DVLKQ-------------- 1979
Fly 1980 --------MTCENEPCRNGSTCQNGFNASTGNNFTCTCV-------------------------- 2010
Fly 2011 ------------PGFEGPLCDI----------PFCEITPCDNGGLCLTTGAVPM--CKCSLGYTG 2051
Fly 2052 RLCE-----QDINE---CESNPCQ--NGGQCKDLVGRYECDCQGTGFEGIRCENDIDECNMEGDY 2106
Fly 2107 CGGLGRCFNKPGSFQC--ICQKPYCGAYCNFTDPCNATDLCSNGGRCVESCGAKPDYYCECPEGF 2169
Fly 2170 AGKNCTAPITAKEDGPSTTDIAIIVIPVVVVLLLIAGALLGTFLVMARNKRATRGTYSPSAQEYC 2234
Fly 2235 NPRLEMDNVLKPPPEERL 2252 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 425..460 | CDD:238011 | 13/35 (37%) | ||
EGF | 466..495 | CDD:278437 | 15/28 (54%) | ||
EGF | 605..633 | CDD:278437 | 11/27 (41%) | ||
EGF_CA | 716..750 | CDD:238011 | 8/33 (24%) | ||
EGF_CA | 753..789 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 792..828 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 830..865 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 868..905 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 907..943 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 11/71 (15%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 20/137 (15%) | ||
EGF | 1316..1346 | CDD:278437 | 13/29 (45%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 16/162 (10%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 8/28 (29%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 20/135 (15%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 14/41 (34%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 12/41 (29%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 8/38 (21%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 10/37 (27%) | ||
Notch3 | NP_064472.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..20 | ||
EGF_CA | 160..197 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 238..274 | CDD:238011 | 17/48 (35%) | ||
EGF_CA | 276..313 | CDD:238011 | 18/122 (15%) | ||
EGF_CA | 316..351 | CDD:238011 | 12/58 (21%) | ||
EGF_CA | 393..431 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 433..469 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 471..507 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 509..545 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 547..582 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 585..620 | CDD:238011 | 18/60 (30%) | ||
EGF_CA | 622..656 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 660..>688 | CDD:238011 | 3/27 (11%) | ||
EGF_CA | 698..731 | CDD:238011 | 8/32 (25%) | ||
EGF_CA | 738..772 | CDD:238011 | 14/38 (37%) | ||
EGF_CA | 812..848 | CDD:238011 | 12/74 (16%) | ||
EGF_CA | 851..886 | CDD:238011 | 15/65 (23%) | ||
EGF_CA | 889..924 | CDD:238011 | 12/97 (12%) | ||
EGF_CA | 931..962 | CDD:238011 | 8/30 (27%) | ||
EGF_CA | 965..1000 | CDD:238011 | 10/44 (23%) | ||
EGF_CA | 1087..1122 | CDD:238011 | 10/34 (29%) | ||
EGF_CA | 1124..1160 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 1173..1205 | CDD:238011 | 10/31 (32%) | ||
NL | 1382..1419 | CDD:197463 | 12/40 (30%) | ||
LNR 1 | 1389..1429 | 13/46 (28%) | |||
NL | 1423..1460 | CDD:197463 | 11/49 (22%) | ||
LNR 2 | 1430..1467 | 14/47 (30%) | |||
LNR 3 | 1469..1507 | 11/44 (25%) | |||
Notch | 1473..1502 | CDD:395019 | 7/28 (25%) | ||
NOD | 1510..1562 | CDD:399654 | 10/50 (20%) | ||
NODP | 1580..1639 | CDD:400155 | |||
JMTM_Notch3 | 1620..1711 | CDD:411987 | |||
ANKYR | <1779..1895 | CDD:223738 | |||
ANK repeat | 1790..1838 | CDD:293786 | |||
ANK repeat | 1840..1871 | CDD:293786 | |||
ANK 1 | 1840..1869 | ||||
ANKYR | 1860..2026 | CDD:223738 | |||
ANK repeat | 1873..1905 | CDD:293786 | |||
ANK 2 | 1873..1903 | ||||
ANK repeat | 1907..1938 | CDD:293786 | |||
ANK 3 | 1907..1936 | ||||
ANK repeat | 1940..1971 | CDD:293786 | |||
ANK 4 | 1940..1969 | ||||
ANK repeat | 1973..2004 | CDD:293786 | |||
ANK 5 | 1973..2002 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2026..2046 | ||||
PHA03247 | <2029..2316 | CDD:223021 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2059..2129 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2197..2319 | ||||
DUF3454 | 2213..2269 | CDD:403221 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.710 |