Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001002827.1 | Gene: | Notch4 / 406162 | RGDID: | 1303282 | Length: | 1961 | Species: | Rattus norvegicus |
Alignment Length: | 2101 | Identity: | 457/2101 - (21%) |
---|---|---|---|
Similarity: | 633/2101 - (30%) | Gaps: | 899/2101 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 272 DPCMGHGTCSSSPEGY-ECRCTARYSGKNCQKDNGSPCAKNP-CENGGSC------LENSRG--- 325
Fly 326 ----DYQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVD 386
Fly 387 TDECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDEC--DKNPCLNGGRCFDTYGWYTC 449
Fly 450 QCLDGWGGEICD-RPMTCQTQQCLNGGTCLDKPIG----FQCLCPPEYTGELCQIAPSCAQQCPI 509
Fly 510 DSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTS 574
Fly 575 RTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTS 639
Fly 640 TGDGASALALTPINCNATN-GKCLNGGTC--SMNGTHCYCAVGYSGDRC-EKAENCSPLNCQEPM 700
Fly 701 VCVQN----QCLCPENK---VC---NQCATQPCQNGGECVDLP-NGDYECKCTRGWTGRTCGNDV 754
Fly 755 DECTL---HPKICGN-GICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYE 815
Fly 816 CVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNG 880
Fly 881 GQCIDQLGGFRCDCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQD 945
Fly 946 INECESNPCQYNGNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEINI 1010
Fly 1011 NECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQR-GTCYDQIDDYDCDCD 1074
Fly 1075 ANYGGKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLI 1139
Fly 1140 SVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGVFIGS 1204
Fly 1205 KLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNLKSYLRHLT 1269
Fly 1270 HQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGECTDLWHTF 1334
Fly 1335 ACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRTREPTGQVFY 1399
Fly 1400 LGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIEVVRNQTLVQ 1464
Fly 1465 VKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEAD 1529
Fly 1530 DSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDRASVLPGEVSDDLCRKNP 1594
Fly 1595 CLHNAECRNTWNDYTCKCPNGYKGKNCQE-IEFCQHVTCPGQSLCQNLDDGYECVTNTTFTGQER 1658
Fly 1659 S-PLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRTRAGGTLLYIDNVDGFFEIGVNGGRVTIT 1722
Fly 1723 WKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLEGGWKG--WESMVDPTPAFSTDIDQAAFQS 1785
Fly 1786 LIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGCVGEARVGDLLLPYFSMAELYSRTNVSVQQK 1850
Fly 1851 AQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECLNTECLNNGT 1915
Fly 1916 CINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGG--NCTDLIASYVCDCPEDYMGPQCDVLK 1978
Fly 1979 QMTCENEPCRNGSTCQNGFNASTG--NNFTCTCVPGFEGPLCD--IPFCEITPCDNGGLCLTT-- 2037
Fly 2038 -GAVPMCKCSLGYTGRLCEQDINEC----------ESNPCQNGGQCKDLVG----RYECDCQGTG 2087
Fly 2088 FEGIRCENDIDECNMEGDYCGGLGRCFNKPGSFQCI--CQKP---YCGAYCNF--TDP---CNAT 2142
Fly 2143 DLC---SNGGRCVESCGAK----PDYYCECPE----------------------------GFAGK 2172
Fly 2173 NCTAPITAKEDGPSTTDIAIIVIPVVVVLLLIAGALLGTFLVM-------------------ARN 2218
Fly 2219 KRATRGTYSPSAQEYCNPRLE 2239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 12/36 (33%) | ||
EGF_CA | 425..460 | CDD:238011 | 13/36 (36%) | ||
EGF | 466..495 | CDD:278437 | 16/32 (50%) | ||
EGF | 605..633 | CDD:278437 | 10/27 (37%) | ||
EGF_CA | 716..750 | CDD:238011 | 11/34 (32%) | ||
EGF_CA | 753..789 | CDD:238011 | 17/39 (44%) | ||
EGF_CA | 792..828 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 830..865 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | 868..905 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 907..943 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 10/35 (29%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 13/35 (37%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 2/134 (1%) | ||
EGF | 1316..1346 | CDD:278437 | 11/29 (38%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 3/161 (2%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 11/28 (39%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 10/137 (7%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 13/36 (36%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 10/50 (20%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 7/41 (17%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 14/75 (19%) | ||
Notch4 | NP_001002827.1 | EGF_CA | 191..>224 | CDD:284955 | 12/32 (38%) |
EGF_CA | 311..349 | CDD:238011 | 15/48 (31%) | ||
EGF_CA | 352..387 | CDD:238011 | 7/34 (21%) | ||
EGF_CA | 429..470 | CDD:238011 | 17/40 (43%) | ||
EGF_CA | 472..508 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 511..546 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | 548..584 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 588..622 | CDD:238011 | 15/33 (45%) | ||
EGF_CA | <696..723 | CDD:238011 | 12/26 (46%) | ||
EGF_CA | 765..800 | CDD:238011 | 11/34 (32%) | ||
EGF_CA | <810..839 | CDD:238011 | 11/28 (39%) | ||
EGF_CA | 892..924 | CDD:238011 | 9/77 (12%) | ||
EGF_CA | 927..961 | CDD:238011 | 12/129 (9%) | ||
EGF_CA | 966..1000 | CDD:238011 | 14/33 (42%) | ||
EGF_CA | 1002..1040 | CDD:238011 | 13/37 (35%) | ||
Notch | 1207..1242 | CDD:278494 | 7/34 (21%) | ||
Notch | 1245..1281 | CDD:278494 | 2/35 (6%) | ||
NOD | 1291..1337 | CDD:284282 | 7/45 (16%) | ||
NODP | 1376..>1415 | CDD:284987 | |||
Ank_2 | <1571..1656 | CDD:289560 | |||
ANK | 1625..1732 | CDD:238125 | |||
ANK repeat | 1626..1656 | CDD:293786 | |||
Ank_2 | 1630..1723 | CDD:289560 | |||
ANK repeat | 1658..1690 | CDD:293786 | |||
ANK | 1687..1811 | CDD:238125 | |||
ANK repeat | 1692..1723 | CDD:293786 | |||
Ank_2 | 1697..1789 | CDD:289560 | |||
ANK repeat | 1725..1756 | CDD:293786 | |||
ANK repeat | 1758..1789 | CDD:293786 | |||
ANK repeat | 1791..1827 | CDD:293786 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |