Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077334.2 | Gene: | Notch2 / 29492 | RGDID: | 3188 | Length: | 2471 | Species: | Rattus norvegicus |
Alignment Length: | 2036 | Identity: | 506/2036 - (24%) |
---|---|---|---|
Similarity: | 682/2036 - (33%) | Gaps: | 835/2036 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 272 DPCMGHGTCSS--SPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSCLENSR-GDYQCFCDP 333
Fly 334 NHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDECASQPCQNN 398
Fly 399 GSCIDRINGFSCDCSGTGYTGAFCQTNVDECD-KNPCLNGGRCFDTYGWYTCQCLDGWGGEICDR 462
Fly 463 P-MTCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQQCPIDSECVGGKCVCKPGSSG 526
Fly 527 PIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTTTGSRRPPQQP 591
Fly 592 LQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALALTPINCNA 656
Fly 657 TNGKCLNGGTC-SMNGTH-CYCAVGYSGDRC-EKAENCSPLNCQEPMVCVQN----QCLCPENK- 713
Fly 714 --VC---NQCATQPCQNGGECVDLP-NGDYECKCTRGWTGRTCGNDVDECTL-HPKICGN-GICK 770
Fly 771 NEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECG 835
Fly 836 SNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYE 900
Fly 901 GENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSN 965
Fly 966 ITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNCNDGIGT 1030
Fly 1031 YTCECEPGFEGTHCEINIDECDRYNPCQRG---------------------TCYDQIDD------ 1068
Fly 1069 -----------YDCDCDANYGGKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQG 1122
Fly 1123 DKCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRL 1187
Fly 1188 NLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRT 1252
Fly 1253 YLGGTIPNLKSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCK 1317
Fly 1318 PNPCHSNGECTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSIL 1382
Fly 1383 DISMFIRTREPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLD 1447
Fly 1448 NGYNHLIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPV 1512
Fly 1513 PGAGIPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDR 1577
Fly 1578 ASVLPG------EVSDDLCRKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQEIEFCQHVTCPGQS 1636
Fly 1637 LCQNLDDGYECVTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRTRAGGTLL 1701
Fly 1702 YIDNVDGFFEIGVNGGRVTITWKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLEGGWKGWES 1766
Fly 1767 MVDPTPAFSTDIDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGCVGEARVGDLLL 1831
Fly 1832 PYFSMAELYSRTNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGD 1896
Fly 1897 DCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIASY 1961
Fly 1962 VCDCPEDYMGPQCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCDI--PFCE 2024
Fly 2025 ITP----------CDNGGLCLTTGAVPMCKCSLGYTGRLCEQDINECESNPCQNGGQCKDLVGRY 2079
Fly 2080 ECDCQGTGFEGIRCENDIDECNMEGDYCGGLGRCFNKPGSFQCICQKPYCGAYCNFT-DPCNATD 2143
Fly 2144 LCSNGGRCVESCGAKPDYYCECPEGFAGKNCTAPITAKEDGPSTTDIAIIVIPV-----VVVLLL 2203
Fly 2204 IAGALLGTFLVMARNKRATRG 2224 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 425..460 | CDD:238011 | 14/35 (40%) | ||
EGF | 466..495 | CDD:278437 | 8/28 (29%) | ||
EGF | 605..633 | CDD:278437 | 10/27 (37%) | ||
EGF_CA | 716..750 | CDD:238011 | 13/34 (38%) | ||
EGF_CA | 753..789 | CDD:238011 | 14/37 (38%) | ||
EGF_CA | 792..828 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 830..865 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 868..905 | CDD:238011 | 19/36 (53%) | ||
EGF_CA | 907..943 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 17/72 (24%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 0/134 (0%) | ||
EGF | 1316..1346 | CDD:278437 | 12/29 (41%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 7/161 (4%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 12/28 (43%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 9/135 (7%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 10/36 (28%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 16/37 (43%) | ||
Notch2 | NP_077334.2 | EGF_CA | 109..143 | CDD:238011 | 9/34 (26%) |
EGF_CA | 182..218 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 260..296 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 298..335 | CDD:238011 | 15/47 (32%) | ||
EGF_CA | 415..454 | CDD:238011 | 14/38 (37%) | ||
EGF_CA | 456..492 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 495..530 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 532..567 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 570..604 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 608..643 | CDD:238011 | 17/60 (28%) | ||
EGF_CA | 645..679 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 682..717 | CDD:238011 | 8/35 (23%) | ||
EGF_CA | 757..793 | CDD:238011 | 16/40 (40%) | ||
EGF_CA | 795..831 | CDD:238011 | 13/195 (7%) | ||
EGF_CA | 873..909 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 911..947 | CDD:238011 | 20/208 (10%) | ||
EGF_CA | 949..985 | CDD:238011 | 14/44 (32%) | ||
EGF_CA | 987..1022 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 1025..1061 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1117..1147 | CDD:238011 | 11/29 (38%) | ||
EGF_CA | 1151..1185 | CDD:238011 | 16/34 (47%) | ||
EGF_CA | 1188..1223 | CDD:238011 | 10/36 (28%) | ||
EGF_CA | 1225..1262 | CDD:238011 | 16/39 (41%) | ||
EGF_CA | 1264..1302 | CDD:238011 | 5/37 (14%) | ||
EGF_CA | <1312..1343 | CDD:238011 | 1/5 (20%) | ||
Notch | 1423..1456 | CDD:278494 | |||
Negative regulatory region (NRR). /evidence=ECO:0000250 | 1425..1677 | ||||
Notch | 1463..1497 | CDD:278494 | |||
Notch | 1501..1534 | CDD:278494 | |||
NOD | 1540..1591 | CDD:284282 | |||
NODP | 1619..1673 | CDD:284987 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1751..1788 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1794..1813 | ||||
Ank_2 | <1820..1907 | CDD:289560 | |||
ANK repeat | 1827..1874 | CDD:293786 | |||
ANK 1 | 1827..1871 | ||||
ANK | 1872..1997 | CDD:238125 | |||
ANK 2 | 1876..1905 | ||||
ANK repeat | 1877..1907 | CDD:293786 | |||
Ank_2 | 1881..1974 | CDD:289560 | |||
ANK 3 | 1909..1939 | ||||
ANK | 1938..2062 | CDD:238125 | |||
ANK repeat | 1943..1974 | CDD:293786 | |||
ANK 4 | 1943..1972 | ||||
Ank_2 | 1948..2040 | CDD:289560 | |||
ANK repeat | 1976..2007 | CDD:293786 | |||
ANK 5 | 1976..2005 | ||||
ANK repeat | 2009..2040 | CDD:293786 | |||
ANK 6 | 2009..2038 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2097..2116 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2380..2471 | ||||
DUF3454 | 2381..2439 | CDD:288764 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |