Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_064303.2 | Gene: | Ltbp1 / 268977 | MGIID: | 109151 | Length: | 1712 | Species: | Mus musculus |
Alignment Length: | 1652 | Identity: | 357/1652 - (21%) |
---|---|---|---|
Similarity: | 537/1652 - (32%) | Gaps: | 631/1652 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 283 SPEGYECRCTARYSGKNCQK--------DNGSPC----AKN--------PCENGGSCLENSRGDY 327
Fly 328 QCFCDPNHSGQHCETEV----------------------NIH-----PLCQTN---------PCL 356
Fly 357 NN-------GACVVIGGSGALTCECPKGYAGARCEVDTDECASQ--PCQNN-------------- 398
Fly 399 -----------GSCIDRINGFSC-----------DCSGT--------------------GYT--- 418
Fly 419 ----------GAFCQTNVDECDKNPCLNGGRCFDTYGWYTCQCLDGWGGE------ICDRPMTCQ 467
Fly 468 TQQCLNGGTC--LDKPIGFQCLCP--PEYTGELCQIA------PSCAQQCPIDSE------CVGG 516
Fly 517 ---------------------KCVCKPGSSGPIGHCLPTTTTPTP---EQEP--TTTPRTTPNPN 555
Fly 556 PAIPNTLTT--TTKIPPITTSRTLV---------GTTTGSRRP----------PQQPLQ------ 593
Fly 594 --------SPTQRSASLNACP-QENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALAL 649
Fly 650 TPINCNATNGKCLNGGTCSMNGTH-CYCAVGYSGDRCEKAENCSPLN-CQEPMVCVQNQCL---- 708
Fly 709 ------------------CPENKVCNQCATQPCQNGGECVDLPNGDYEC-KCT---RGWTGRTCG 751
Fly 752 NDVDECTLHPKICGNGICKNEKGSYKCYCTPGFTGV----HCDSDVDECLSFP-CLNGATCHNKI 811
Fly 812 NAYECVCQPGYE----GENCEVDIDECGSNP-CSNGSTCIDRINNFTCNCIPGMTGRICDIDIDD 871
Fly 872 CVGDPCLNGGQCIDQLGGFRCDCSGTGYE----GENCELNIDECL--SNPCTNGAKCLDRVKDYF 930
Fly 931 CDCHNGYK---GKNCEQDINEC-ESNPCQYNGNCLERSNITLYQMSRITDLPKVFSQPFSFENAS 991
Fly 992 G-YECVCVPGII----GKNCEININECDSNP-CSKHGNCNDGIGTYTCECEPGF----EGTHCEI 1046
Fly 1047 NIDECDRYN-PCQRGTCYDQIDDYDCDC-DAN--YG---GKNCSVLLK--GCDQNPCLNGGACLP 1102
Fly 1103 YLINEVTHLYN----------CTCENGF-QGDKCEKTTTLSMVATSLISVTTEREEGYDINLQFR 1156
Fly 1157 TTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTS 1221
Fly 1222 HLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNLKSYLRHLTHQPSAFVGCMQDIMVNG 1286
Fly 1287 KWIFPDEQDANISYTKLENVQSGCPRTEQCK-PNPCHSNGECTDLWHTFACHCPRPFFGHTCQHN 1350
Fly 1351 MTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNIGDS 1415
Fly 1416 YVAAKLHGGELLVKMQFSGTPEAYTVGGQ-----------KLDNGYNHLIEVVRNQTLVQVKLNG 1469
Fly 1470 TEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEADDSRDY 1534
Fly 1535 FKGIIQDVKV---------SNGSLNLIVEMYSLNVTD-VQVNAKPLGAVTIDRASVLPGEVSDDL 1589
Fly 1590 CRKNPCLHNAECRNTWNDYTCKCPNGY 1616 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 15/107 (14%) | ||
EGF_CA | 425..460 | CDD:238011 | 11/40 (28%) | ||
EGF | 466..495 | CDD:278437 | 8/32 (25%) | ||
EGF | 605..633 | CDD:278437 | 8/28 (29%) | ||
EGF_CA | 716..750 | CDD:238011 | 14/37 (38%) | ||
EGF_CA | 753..789 | CDD:238011 | 19/39 (49%) | ||
EGF_CA | 792..828 | CDD:238011 | 13/40 (33%) | ||
EGF_CA | 830..865 | CDD:238011 | 7/35 (20%) | ||
EGF_CA | 868..905 | CDD:238011 | 10/40 (25%) | ||
EGF_CA | 907..943 | CDD:238011 | 13/40 (33%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 14/40 (35%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 10/41 (24%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 16/134 (12%) | ||
EGF | 1316..1346 | CDD:278437 | 9/30 (30%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 24/181 (13%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 10/24 (42%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | |||
EGF_CA | 1901..1937 | CDD:238011 | |||
EGF_CA | 1939..1974 | CDD:238011 | |||
EGF_CA | 2057..2094 | CDD:238011 | |||
EGF_CA | 2096..2133 | CDD:238011 | |||
EGF_CA | 2137..2175 | CDD:238011 | |||
Ltbp1 | NP_064303.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 65..118 | ||
EGF_CA | 618..>648 | CDD:214542 | 9/29 (31%) | ||
TB | 681..716 | CDD:279073 | 8/35 (23%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 753..799 | 11/49 (22%) | |||
EGF_CA | 907..947 | CDD:284955 | 8/46 (17%) | ||
EGF_CA | 949..985 | CDD:214542 | 4/35 (11%) | ||
EGF_CA | 990..1023 | CDD:238011 | 11/36 (31%) | ||
EGF_CA | 1030..1070 | CDD:214542 | 21/41 (51%) | ||
EGF_CA | 1071..1102 | CDD:214542 | 12/31 (39%) | ||
EGF_CA | 1112..1152 | CDD:214542 | 17/79 (22%) | ||
EGF_CA | 1153..1189 | CDD:214542 | 12/36 (33%) | ||
EGF_CA | 1194..1235 | CDD:214542 | 16/67 (24%) | ||
EGF_CA | 1236..1277 | CDD:214542 | 15/41 (37%) | ||
8-Cys3 region. /evidence=ECO:0000250|UniProtKB:Q14766 | 1335..1402 | 15/77 (19%) | |||
TB | 1350..1387 | CDD:279073 | 9/37 (24%) | ||
EGF_CA | 1458..>1484 | CDD:214542 | 7/26 (27%) | ||
C-terminal domain. /evidence=ECO:0000250|UniProtKB:Q14766 | 1498..1712 | 50/286 (17%) | |||
TB | 1527..1563 | CDD:279073 | 7/41 (17%) | ||
EGF_CA | 1653..>1687 | CDD:214542 | 13/41 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |