Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099191.1 | Gene: | Notch1 / 25496 | RGDID: | 3187 | Length: | 2531 | Species: | Rattus norvegicus |
Alignment Length: | 2070 | Identity: | 534/2070 - (25%) |
---|---|---|---|
Similarity: | 700/2070 - (33%) | Gaps: | 790/2070 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 223 SGCLLDGPGLQFVNNSTVQNVVFG-----HCPLTPGPC-------------SDH----DLFTRLP 265
Fly 266 ------------DNFCLNDPCMGHGTCS-SSPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGG 317
Fly 318 SCL---------------------------------------ENSRGDYQCFCDPNHSGQHCETE 343
Fly 344 VNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDECASQPCQNNGSCIDRINGF 408
Fly 409 SCDCSGTGYTGAFCQTNVDECD--KNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPM-TCQTQQ 470
Fly 471 CLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSC-AQQCPIDSEC----VGGK--CVCKPGSSGPI 528
Fly 529 GHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTTTGSRRPPQQPLQ 593
Fly 594 SPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALALTPINCNATN 658
Fly 659 GKCLNGGTC--SMNGTHCYCAVGYSGDRCEKAENCSPLNCQEPMVCVQNQCLCPENKVCNQCATQ 721
Fly 722 PCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKICGNGI-CKNEKGSYKCYCTPGFT 785
Fly 786 GVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRIN 850
Fly 851 NFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCELNIDECLSNP 915
Fly 916 CTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSNITLYQMSRITDLPKV 980
Fly 981 FSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCE 1045
Fly 1046 INIDECDRYNPC-QRGTCYDQIDDYDCDCDANYGGKNCSVLLKGCDQNPCLNGGACLPYLINEVT 1109
Fly 1110 HLYNCTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNE 1174
Fly 1175 PVSYILELINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSY 1239
Fly 1240 ETANNSQPSFPRTYLGGTIPNLKSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLE 1304
Fly 1305 NVQSGCPRTEQCKPNPCHSNGECTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVE 1369
Fly 1370 TTDVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSG 1434
Fly 1435 TPEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRES 1499
Fly 1500 LL-GATTEPGI-----IPVPGAGIPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSL 1558
Fly 1559 NVTDVQVNAKPLGAVTIDRASVLPGEVSDDLCRKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQE 1623
Fly 1624 -IEFCQHVTCPGQSLCQNLDDGYECVTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPV 1687
Fly 1688 IDIAFRTRAGGTLLYIDNVDGFFEIGVNGGRVTITWKLSALHFGESARFEKENTDGEWSRIYLRA 1752
Fly 1753 HNSKLEGGWKGWESMVDPTPAFSTDIDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQF 1817
Fly 1818 KGCVGEARVGDLLLPYFSMAELYSRTNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPS 1882
Fly 1883 DEYACTCQPGFEGDDCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQP 1947
Fly 1948 CHNGGNCTDLIASYVCDCPEDYMGPQCDVLKQMTC--------ENEPCRNGSTC--QNGFNASTG 2002
Fly 2003 NNFTCTCVPGFEGPLC--DIPFCEITPCDNGGLCLTTGAVPM-----CKCSLGYTGRLCEQDINE 2060
Fly 2061 CESNPCQNGGQC---KDLVGRYECDCQGTGFEGIRCENDIDECNMEGDY-CGGLGRCFNKPGSFQ 2121
Fly 2122 CICQKPYCGAYCNF--TDPCNATDLCSNGGRCVESCGAKPDYYCECPEGFAGKNC 2174 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | 2/4 (50%) |
EGF_CA | 386..423 | CDD:238011 | 12/36 (33%) | ||
EGF_CA | 425..460 | CDD:238011 | 18/36 (50%) | ||
EGF | 466..495 | CDD:278437 | 11/28 (39%) | ||
EGF | 605..633 | CDD:278437 | 10/27 (37%) | ||
EGF_CA | 716..750 | CDD:238011 | 13/33 (39%) | ||
EGF_CA | 753..789 | CDD:238011 | 17/36 (47%) | ||
EGF_CA | 792..828 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 830..865 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 868..905 | CDD:238011 | 14/36 (39%) | ||
EGF_CA | 907..943 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 16/35 (46%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 11/134 (8%) | ||
EGF | 1316..1346 | CDD:278437 | 14/29 (48%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 19/167 (11%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 13/28 (46%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 10/135 (7%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 15/39 (38%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 11/37 (30%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 15/38 (39%) | ||
Notch1 | NP_001099191.1 | EGF_CA | 142..175 | CDD:238011 | 11/32 (34%) |
EGF_CA | 178..216 | CDD:238011 | 8/37 (22%) | ||
EGF_CA | 257..293 | CDD:238011 | 12/36 (33%) | ||
EGF_CA | 295..332 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 335..370 | CDD:238011 | 12/34 (35%) | ||
EGF_CA | 412..450 | CDD:238011 | 14/40 (35%) |