Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157038.1 | Gene: | Crb2 / 241324 | MGIID: | 2679260 | Length: | 1282 | Species: | Mus musculus |
Alignment Length: | 1588 | Identity: | 458/1588 - (28%) |
---|---|---|---|
Similarity: | 635/1588 - (39%) | Gaps: | 403/1588 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 718 CATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKICGNG-IC---KNEKGSYKC 778
Fly 779 YCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECGSNPCSNGS 843
Fly 844 TCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCELNI 908
Fly 909 DECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSNITLYQMSR 973
Fly 974 ITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNCNDGIGTYTCECEPG 1038
Fly 1039 FEGTHCEINIDECDRYNPC-QRGTCYDQIDDYDCDCDANYGGKNCSVLLKGCDQNPCLNGGACLP 1102
Fly 1103 YLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFG 1167
Fly 1168 TTGEKNEPVSYIL--ELINGRLNLHSSLLNKWEGVFI----GSKLNDSNWHKVFVAINTSHLVLS 1226
Fly 1227 ANDE-------QAIFPVGSYETAN--NSQPSFPRTYLGGTIPNLKSYLRHLTHQPSAFVGCMQDI 1282
Fly 1283 MVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGECTDLWHTFACHCPRPFFGHTC 1347
Fly 1348 QHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNI 1412
Fly 1413 GDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLNGTEYFRKTL 1477
Fly 1478 STTGLLD-AQVLYLGGP-APTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEADDSRDYFKGIIQ 1540
Fly 1541 DVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDRASVLPGEVSDDLCRKNPCLHNAECRNTW 1605
Fly 1606 NDYTCKCPNGYKGKNCQEIEFCQHVTCPGQSLCQNLDDGYECVTNTTFTGQERSPLAFFYFQEQQ 1670
Fly 1671 SDDIVSEASPKQTLKPVIDIAFRTRAGGTLLYIDNVDGFFEIGVNGGRVTITWKLSALHFGESAR 1735
Fly 1736 FEKENTDGEWSRIYLRAHNSKLEGGWKGWESMVDPTPA------------FSTDIDQAAFQSLIA 1788
Fly 1789 TSTQVYLGG--MPESRQARGSTLSAQQG---------SQFKGCVGEARVGDLLLPYFSMAELYSR 1842
Fly 1843 TNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECLN 1907
Fly 1908 TECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIASYVCDCPEDYMGP 1972
Fly 1973 QCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCDIPFCEITPCDNGGLCLTT 2037
Fly 2038 GAVPMCKCSLGYTGRLCEQDINECESNPCQNGGQCKDLVGRYECDCQGTGFEGIRCENDIDECNM 2102
Fly 2103 EGDYCGGLGRCFNKPGSFQCICQKPYCGAYCNFTD-PCNATDLCSNGGRCVESCGAKPDYYCECP 2166
Fly 2167 EGFAGKNC----TAPITAKEDGPSTTDIAIIVIPV--VVVLLLIAGALLGTFLVMARNKRATRGT 2225
Fly 2226 YSPSAQEYCNPRLEMDNVLKPPPEERLI 2253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | |||
EGF_CA | 425..460 | CDD:238011 | |||
EGF | 466..495 | CDD:278437 | |||
EGF | 605..633 | CDD:278437 | |||
EGF_CA | 716..750 | CDD:238011 | 9/31 (29%) | ||
EGF_CA | 753..789 | CDD:238011 | 13/39 (33%) | ||
EGF_CA | 792..828 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 830..865 | CDD:238011 | 14/34 (41%) | ||
EGF_CA | 868..905 | CDD:238011 | 20/36 (56%) | ||
EGF_CA | 907..943 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 14/35 (40%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 41/149 (28%) | ||
EGF | 1316..1346 | CDD:278437 | 16/29 (55%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 31/163 (19%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 11/28 (39%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 31/158 (20%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 5/34 (15%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 4/36 (11%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 7/36 (19%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 16/42 (38%) | ||
Crb2 | NP_001157038.1 | EGF_CA | <79..110 | CDD:238011 | 13/32 (41%) |
EGF_CA | 112..148 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 151..186 | CDD:238011 | 14/34 (41%) | ||
EGF_CA | 188..225 | CDD:238011 | 20/36 (56%) | ||
EGF_CA | 230..263 | CDD:238011 | 13/32 (41%) | ||
EGF_CA | 324..360 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 362..397 | CDD:238011 | 14/35 (40%) | ||
Laminin_G_2 | 469..592 | CDD:280389 | 40/146 (27%) | ||
EGF | 613..643 | CDD:278437 | 16/29 (55%) | ||
LamG | 666..776 | CDD:238058 | 33/171 (19%) | ||
EGF | 814..844 | CDD:278437 | 12/29 (41%) | ||
Laminin_G_2 | 901..1018 | CDD:280389 | 31/158 (20%) | ||
EGF_CA | 1058..1089 | CDD:238011 | 11/30 (37%) | ||
EGF_CA | 1175..1206 | CDD:238011 | 12/34 (35%) | ||
Interaction with EPB41L5. /evidence=ECO:0000250|UniProtKB:Q5IJ48 | 1246..1282 | 23/35 (66%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10449 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D111153at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003041 | |
OrthoInspector | 1 | 1.000 | - | - | otm42733 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3765 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.750 |