Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510437.2 | Gene: | slt-1 / 181562 | WormBaseID: | WBGene00004854 | Length: | 1410 | Species: | Caenorhabditis elegans |
Alignment Length: | 1541 | Identity: | 324/1541 - (21%) |
---|---|---|---|
Similarity: | 487/1541 - (31%) | Gaps: | 554/1541 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 SCRGGEILAQQYNKNSIVISVLNDFLQISLAGPAVH--GPN---NRLDVKLPYQLLDNR------ 170
Fly 171 --WHTLQFKYEYGNLYLHVDRAASIFANSTYNSQFLTNQDIGYKDAILILGNSFSGCLLDGPGLQ 233
Fly 234 FVNNSTVQNVVFGHCPLTPGPCSDHDLFT-------------RL-----PDNF------CLNDPC 274
Fly 275 MGHGTCSSSPEGYECRCTARYSGKNCQK---DNGSPCAKNPCENGGSCLENSRGDYQCFCDPNHS 336
Fly 337 GQH---CETEVNIHPLCQTNPCLNNGACVVIGGSGAL---------TCEC--------------- 374
Fly 375 --------------------PKGYAGARCEVDT--------DECASQPCQNNGS---CIDRINGF 408
Fly 409 SCDCSGT-GYTGAFCQTNVDECD---------------------KNPCLNGGRCFDTYGWYTCQC 451
Fly 452 LDGW------------GGEICDRPMTCQTQQCLNGGTCLDKPIGFQCLCPPEYT---GELCQIAP 501
Fly 502 SCAQQCPIDSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPR------------TTPNP 554
Fly 555 NPAI------------PNTLT------------------TTTKIPPITT---------------- 573
Fly 574 ------SRTLVGTTTGSRR---------------PPQQPLQSPTQRSASLNACPQENCLNGGTCL 617
Fly 618 GYSGNYS--CICASGYTGYNCQTSTGDGASALALTPINCNATNG--KCLNGGTCS------MNGT 672
Fly 673 HCYCAVGY--------------------SGDRCEKAEN--CSPLNCQEPMVCVQNQCLCPENKVC 715
Fly 716 NQCATQPCQ------------NGGECVDLPNGDYE----------------CKCTRGWTGRTCGN 752
Fly 753 DVDECTL----HPKICGNGICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINA 813
Fly 814 YECVCQPGYEGENCEVDIDECGSNPCSNGSTC-IDRINNFTCNCIPGMTGRICDIDIDDCVGDPC 877
Fly 878 LNGGQC-IDQLGGFRCDCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKN 941
Fly 942 CEQDINEC--ESNPCQYNGNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGK 1004
Fly 1005 NCEININECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQRGTCYDQIDDY 1069
Fly 1070 DCDCDANYGGKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMV 1134
Fly 1135 ATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYI-LELINGRLNLHSSLLNKWE 1198
Fly 1199 GVFIGS----------KLNDSNWHKVFVAINTSH----LVLSANDEQAIFPVGSYETANNSQPSF 1249
Fly 1250 PR----TYLGGTIPNLKSY---LRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENV- 1306
Fly 1307 -QSGCPRTEQ-CKPNPCHSNGECTDLWHT---FACHCPRPFFGHTC 1347 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | 27/123 (22%) |
EGF_CA | 386..423 | CDD:238011 | 8/48 (17%) | ||
EGF_CA | 425..460 | CDD:238011 | 8/67 (12%) | ||
EGF | 466..495 | CDD:278437 | 3/31 (10%) | ||
EGF | 605..633 | CDD:278437 | 8/29 (28%) | ||
EGF_CA | 716..750 | CDD:238011 | 8/61 (13%) | ||
EGF_CA | 753..789 | CDD:238011 | 6/39 (15%) | ||
EGF_CA | 792..828 | CDD:238011 | 3/35 (9%) | ||
EGF_CA | 830..865 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 868..905 | CDD:238011 | 17/37 (46%) | ||
EGF_CA | 907..943 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 3/34 (9%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 37/156 (24%) | ||
EGF | 1316..1346 | CDD:278437 | 10/32 (31%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | |||
EGF_CA | <1593..1622 | CDD:238011 | |||
Laminin_G_2 | 1692..1828 | CDD:280389 | |||
EGF_CA | 1901..1937 | CDD:238011 | |||
EGF_CA | 1939..1974 | CDD:238011 | |||
EGF_CA | 2057..2094 | CDD:238011 | |||
EGF_CA | 2096..2133 | CDD:238011 | |||
EGF_CA | 2137..2175 | CDD:238011 | |||
slt-1 | NP_510437.2 | LRRNT | 17..47 | CDD:214470 | 6/24 (25%) |
leucine-rich repeat | 26..45 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | <48..195 | CDD:238064 | 33/165 (20%) | ||
LRR_8 | 48..104 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 48..69 | CDD:275380 | 4/20 (20%) | ||
leucine-rich repeat | 70..93 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 94..152 | CDD:290566 | 16/66 (24%) | ||
leucine-rich repeat | 94..117 | CDD:275380 | 5/25 (20%) | ||
leucine-rich repeat | 118..165 | CDD:275380 | 13/61 (21%) | ||
LRR_8 | 142..196 | CDD:290566 | 10/63 (16%) | ||
leucine-rich repeat | 142..163 | CDD:275380 | 5/30 (17%) | ||
leucine-rich repeat | 166..284 | CDD:275380 | 32/137 (23%) | ||
LRRCT | 195..243 | CDD:214507 | 13/62 (21%) | ||
LRRNT | 259..291 | CDD:214470 | 10/35 (29%) | ||
leucine-rich repeat | 285..312 | CDD:275380 | 2/26 (8%) | ||
LRR_8 | 287..347 | CDD:290566 | 6/60 (10%) | ||
LRR_4 | 311..352 | CDD:289563 | 4/41 (10%) | ||
leucine-rich repeat | 313..336 | CDD:275380 | 3/23 (13%) | ||
LRR_8 | 336..419 | CDD:290566 | 11/82 (13%) | ||
leucine-rich repeat | 337..384 | CDD:275380 | 8/46 (17%) | ||
leucine-rich repeat | 385..408 | CDD:275380 | 1/22 (5%) | ||
LRRCT | 417..466 | CDD:214507 | 10/66 (15%) | ||
LRRNT | 484..512 | CDD:214470 | 9/46 (20%) | ||
leucine-rich repeat | 494..516 | CDD:275380 | 6/36 (17%) | ||
LRR_RI | <514..635 | CDD:238064 | 10/120 (8%) | ||
leucine-rich repeat | 517..538 | CDD:275380 | 3/20 (15%) | ||
LRR_8 | 538..597 | CDD:290566 | 3/58 (5%) | ||
leucine-rich repeat | 539..562 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 563..586 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 587..610 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 611..675 | CDD:275380 | 15/80 (19%) | ||
leucine-rich repeat | 676..729 | CDD:275380 | 9/52 (17%) | ||
LRRNT | 677..708 | CDD:214470 | 5/30 (17%) | ||
LRR_8 | 729..788 | CDD:290566 | 11/68 (16%) | ||
LRR_4 | 729..771 | CDD:289563 | 10/51 (20%) | ||
leucine-rich repeat | 730..753 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 754..777 | CDD:275380 | 4/32 (13%) | ||
leucine-rich repeat | 778..799 | CDD:275380 | 3/20 (15%) | ||
EGF_CA | 909..945 | CDD:238011 | 17/36 (47%) | ||
EGF_CA | 947..983 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | <994..1023 | CDD:238011 | 14/54 (26%) | ||
EGF_CA | 1025..1061 | CDD:238011 | 15/35 (43%) | ||
LamG | 1133..1268 | CDD:214598 | 38/165 (23%) | ||
CT | 1334..1405 | CDD:214482 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |