Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017172782.1 | Gene: | Notch3 / 18131 | MGIID: | 99460 | Length: | 2330 | Species: | Mus musculus |
Alignment Length: | 2012 | Identity: | 506/2012 - (25%) |
---|---|---|---|
Similarity: | 679/2012 - (33%) | Gaps: | 755/2012 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 254 PCSDHDLFTRLPDNFCLNDPCMGHGTCSSSPEGYE--CRCTARYSGKNCQKDNGSPCAKNPCENG 316
Fly 317 GSCLEN---SRGDYQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGY 378
Fly 379 AGARCEVDTDECAS-QPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRCFD 442
Fly 443 TYG-WYTCQCLDGWGGEICDRPM-TCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQ 505
Fly 506 QCPIDSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPP 570
Fly 571 ITTSRTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYN 635
Fly 636 CQTSTGDGASALALTPINCNATNGKCLNGGTC--SMNGTHCYCAVGYSGDRCEKAENCSPLNCQE 698
Fly 699 PMVCVQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKI 763
Fly 764 CGN-GICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENC 827
Fly 828 EVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRC 892
Fly 893 DCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYN 957
Fly 958 GNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHG 1022
Fly 1023 NCNDGIGTYTCECEPGFEGTHCEINIDECD----------------------------------- 1052
Fly 1053 --RYNPCQRGTCYDQIDDYDCDCDANYGGKNCSVLL--KGCDQNPCLNGGACLPYLINEVTHLYN 1113
Fly 1114 CTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTL---PNGVLAFGTTGEKNEP 1175
Fly 1176 VSYILELINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYE 1240
Fly 1241 TANNSQPSFPRTYLGGTIPNLKSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLEN 1305
Fly 1306 VQSGCPRTEQCKPNPCHSNGECTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVET 1370
Fly 1371 TDVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGT 1435
Fly 1436 PEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESL 1500
Fly 1501 LGATTEPGIIPVPGAGIPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQV 1565
Fly 1566 NAKPLGAVTIDRASVLPGEVSDDLCRKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQ-EIEFCQH 1629
Fly 1630 VTCPGQSLCQNLDDGYECVTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRT 1694
Fly 1695 RAGGTLLYIDNVDGFFEIGVNGGRVTITWKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLEG 1759
Fly 1760 GW----KGWESMVDPTPAFSTDIDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGC 1820
Fly 1821 VGEARVGDLLLPYFSMAELYSRTNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEY 1885
Fly 1886 ACTCQPGFEGDDCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHN 1950
Fly 1951 GGNCTDLIASYVCDCPEDYMGPQCDVLKQMTCENEP-CRNGSTC-QNGFNASTGNNFTCTCVPGF 2013
Fly 2014 EGPLCDIPFCEITPCDNGGL-------CL-TTGAVPMCKCSLGYTGRLCEQDINECESNPCQNGG 2070
Fly 2071 QCKDLVGR-----YECDCQGTGFEGIRCENDIDECNMEGDYCGGLGRCFNKPGSFQCICQKPYCG 2130
Fly 2131 AYCNFT--DPCNATDL------CSNGGRC--VESCGAKPDYYCECPEGFAGKNCTAPITAKE 2182 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 15/37 (41%) | ||
EGF_CA | 425..460 | CDD:238011 | 14/35 (40%) | ||
EGF | 466..495 | CDD:278437 | 15/28 (54%) | ||
EGF | 605..633 | CDD:278437 | 11/27 (41%) | ||
EGF_CA | 716..750 | CDD:238011 | 8/33 (24%) | ||
EGF_CA | 753..789 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 792..828 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 830..865 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 868..905 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 907..943 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 11/71 (15%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 21/137 (15%) | ||
EGF | 1316..1346 | CDD:278437 | 13/29 (45%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 11/161 (7%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 7/28 (25%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 17/139 (12%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 10/35 (29%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 21/34 (62%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 17/41 (41%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 7/36 (19%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 14/45 (31%) | ||
Notch3 | XP_017172782.1 | EGF_CA | 159..196 | CDD:238011 | 15/37 (41%) |
EGF_CA | 237..273 | CDD:238011 | 17/48 (35%) | ||
EGF_CA | 275..312 | CDD:238011 | 18/122 (15%) | ||
EGF_CA | 315..350 | CDD:238011 | 12/58 (21%) | ||
EGF_CA | 392..430 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 432..468 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 470..506 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 508..544 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 546..581 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 584..619 | CDD:238011 | 18/60 (30%) | ||
EGF_CA | 621..655 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 659..>687 | CDD:238011 | 3/27 (11%) | ||
EGF_CA | 697..730 | CDD:238011 | 8/32 (25%) | ||
EGF_CA | 737..771 | CDD:238011 | 14/38 (37%) | ||
EGF_CA | 811..847 | CDD:238011 | 11/72 (15%) | ||
EGF_CA | 850..885 | CDD:238011 | 15/65 (23%) | ||
EGF_CA | 888..923 | CDD:238011 | 10/102 (10%) | ||
EGF_CA | 930..961 | CDD:238011 | 7/30 (23%) | ||
EGF_CA | 965..999 | CDD:238011 | 10/43 (23%) | ||
EGF_CA | 1086..1121 | CDD:238011 | 10/34 (29%) | ||
EGF_CA | 1123..1159 | CDD:238011 | 21/35 (60%) | ||
EGF_CA | 1172..1204 | CDD:238011 | 10/31 (32%) | ||
NL | 1381..1418 | CDD:197463 | 1/1 (100%) | ||
NL | 1422..1459 | CDD:197463 | |||
Notch | 1475..1501 | CDD:365847 | |||
NOD | 1506..1558 | CDD:369091 | |||
NODP | 1579..1634 | CDD:369464 | |||
ANKYR | <1786..1906 | CDD:223738 | |||
ANK repeat | 1801..1849 | CDD:293786 | |||
ANK repeat | 1851..1882 | CDD:293786 | |||
ANKYR | 1871..2037 | CDD:223738 | |||
ANK repeat | 1884..1916 | CDD:293786 | |||
ANK repeat | 1918..1949 | CDD:293786 | |||
ANK repeat | 1951..1982 | CDD:293786 | |||
ANK repeat | 1984..2015 | CDD:293786 | |||
PHA03247 | <2040..2327 | CDD:223021 | |||
DUF3454 | 2224..2286 | CDD:371809 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.710 |