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Protein Alignment crb and arg-1
DIOPT Version :9
Sequence 1: | NP_001247284.1 |
Gene: | crb / 42896 |
FlyBaseID: | FBgn0259685 |
Length: | 2253 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001024615.1 |
Gene: | arg-1 / 180501 |
WormBaseID: | WBGene00000185 |
Length: | 357 |
Species: | Caenorhabditis elegans |
Alignment Length: | 163 |
Identity: | 49/163 - (30%) |
Similarity: | 69/163 - (42%) |
Gaps: | 24/163 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 1889 CQPGFEGDDCGTDI--DECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQ-PCHN 1950
|...:.|..|.... ...|:.||..||. .||..|:.|..|..||..|:.| ||.|
Worm 131 CTSNYYGKRCNRYCIPSPALHWECSTNGV---------RQCAVGWYGDDCSSNIKFCSHQNPCAN 186
Fly 1951 GGNCTDLIASYVCDCPEDYMGPQCDV-LKQMTCENE-PCRNGSTCQNGFNASTGNNFTCTCVPGF 2013
||.|: ..|.|.||.:::||:|:. :.::.|..| .|::|.||. :....|..|.|:.||
Worm 187 GGVCS---TDYKCQCPSEFLGPRCETPVSKVHCTLERVCKHGGTCV----SVNRTNVQCKCIRGF 244
Fly 2014 EGPLCDIPF---CEITPCDNGGLCLTTGAVPMC 2043
.|.||:|.. |....|.....|....:..:|
Worm 245 LGSLCEIGIHGNCSAMRCSVDETCQIRASFAVC 277
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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