Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001359624.1 | Gene: | egas-1 / 180219 | WormBaseID: | WBGene00013486 | Length: | 922 | Species: | Caenorhabditis elegans |
Alignment Length: | 1284 | Identity: | 259/1284 - (20%) |
---|---|---|---|
Similarity: | 384/1284 - (29%) | Gaps: | 597/1284 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 238 STVQNVVFGHCPLT-PGPCSDHDLFTRL-------------------PDN-FCL----------- 270
Fly 271 -------NDPC--MGHGTCSSSPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSC--LENSR 324
Fly 325 GDYQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDE 389
Fly 390 CASQPCQNNGSC---IDRINGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRCFDTYGWYTCQC 451
Fly 452 LDGWGGEICDRPMTCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQQCPIDSECVGG 516
Fly 517 KCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTT 581
Fly 582 TGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGY---------SGNYSCICASGYTGYNCQ 637
Fly 638 TSTGDGASALALTPINCNATNGKCLNGGTCSMNGTHCYCAVGYSGDRCEKAENCSPLNCQEPMVC 702
Fly 703 VQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDE-CTLHPKIC-- 764
Fly 765 --------GNGICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPG 821
Fly 822 YEGENCEVDIDE-CGSNPCSNGSTCI--DRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQC 883
Fly 884 ID-QLGGFRCDCSGTGYEGENCELNIDEC-LSNPCTNGAKCLDRV----KDYFCDCHNGYKGKNC 942
Fly 943 EQDINECESNPCQYNGNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCE 1007
Fly 1008 ININEC----DS------NPCSKH---GNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQR 1059
Fly 1060 GTCYDQIDDYDCDCDANYGGKNCSV--LLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQG 1122
Fly 1123 DKCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRL 1187
Fly 1188 NLHSSLLNKWEGVFIGS-------------KLNDSNWH---KVFV--------------AINTSH 1222
Fly 1223 LVLSANDEQAIFPVGSYETANNSQPSFPRTY---------LGGTI-------PNLKSYLRHLTHQ 1271
Fly 1272 PSAFV--GCM----QDIMVNGKWIFPDEQDANI---SYTKLENVQSGCPRTEQ-CKPNPCHSNGE 1326
Fly 1327 CTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIV-ETTDVA 1374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 10/39 (26%) | ||
EGF_CA | 425..460 | CDD:238011 | 5/34 (15%) | ||
EGF | 466..495 | CDD:278437 | 3/28 (11%) | ||
EGF | 605..633 | CDD:278437 | 7/36 (19%) | ||
EGF_CA | 716..750 | CDD:238011 | 6/33 (18%) | ||
EGF_CA | 753..789 | CDD:238011 | 6/46 (13%) | ||
EGF_CA | 792..828 | CDD:238011 | 10/35 (29%) | ||
EGF_CA | 830..865 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 868..905 | CDD:238011 | 14/37 (38%) | ||
EGF_CA | 907..943 | CDD:238011 | 14/40 (35%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 15/48 (31%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 7/34 (21%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 31/186 (17%) | ||
EGF | 1316..1346 | CDD:278437 | 7/29 (24%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | |||
EGF_CA | <1593..1622 | CDD:238011 | |||
Laminin_G_2 | 1692..1828 | CDD:280389 | |||
EGF_CA | 1901..1937 | CDD:238011 | |||
EGF_CA | 1939..1974 | CDD:238011 | |||
EGF_CA | 2057..2094 | CDD:238011 | |||
EGF_CA | 2096..2133 | CDD:238011 | |||
EGF_CA | 2137..2175 | CDD:238011 | |||
egas-1 | NP_001359624.1 | deg-1 | <595..908 | CDD:273309 | 57/338 (17%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |