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Protein Alignment crb and Gas6

DIOPT Version :9

Sequence 1:	NP_001247284.1	Gene:	crb / 42896	FlyBaseID:	FBgn0259685	Length:	2253	Species:	Drosophila melanogaster
Sequence 2:	NP_062394.2	Gene:	Gas6 / 14456	MGIID:	95660	Length:	674	Species:	Mus musculus

Alignment Length:	723	Identity:	161/723 - (22%)
Similarity:	261/723 - (36%)	Gaps:	201/723 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   904 CELNI-DECLSNPCTNGAK--CLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSN 965
            |..|: |:|..|||.....  |.|.:.::||.|.:|:.|:.|::|:|||    .|.||.|.:..:
Mouse   109 CVQNLPDQCTPNPCDKKGTHICQDLMGNFFCVCTDGWGGRLCDKDVNEC----VQKNGGCSQVCH 169

  Fly   966 ITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGII----GKNCEININEC-DSNPCSKHGNCN 1025
                            ::|.||      :|.|..|..    |:.|: :|:|| ||:.|. ...|.
Mouse   170 ----------------NKPGSF------QCACHSGFSLASDGQTCQ-DIDECTDSDTCG-DARCK 210

  Fly  1026 DGIGTYTCECEPGF-----EGTHCEINIDECDRYNPCQRGTCYDQIDDYDCDCDANYGGKNCSVL 1085
            :..|:|:|.|:.|:     |.| |: ::|||.: :.|:: ||.:....|.|.||.. ||...|.
Mouse   211 NLPGSYSCLCDEGYTYSSKEKT-CQ-DVDECQQ-DRCEQ-TCVNSPGSYTCHCDGR-GGLKLSP- 269

  Fly  1086 LKGCDQNPCLNGGACLPY-LINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGY 1149
                |.:.|.:...|:|: :...|..||   ....|.|....:.....:..|.|::
Mouse   270 ----DMDTCEDILPCVPFSMAKSVKSLY---LGRMFSGTPVIRLRFKRLQPTRLLA--------- 318

  Fly  1150 DINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGV----FIGSKLNDSN 1210
              ...|||..|.|||.|  .|.:::....:|.|..|||.|..    ::.||    ..|..:|...
Mouse   319 --EFDFRTFDPEGVLFF--AGGRSDSTWIVLGLRAGRLELQL----RYNGVGRITSSGPTINHGM 375

  Fly  1211 WHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNLKSYLRHLTHQPSAF 1275
            |..:.|.....:||:..| :.|:..:.                :.|.:..|:..|.||
Mouse   376 WQTISVEELERNLVIKVN-KDAVMKIA----------------VAGELFQLERGLYHL------- 416

  Fly  1276 VGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGECTDLWHTFACHCPR 1340
                 ::.|.|           |.:.:.|.||...||.:.|..:....|||.:.:..|...:...
Mouse   417 -----NLTVGG-----------IPFKESELVQPINPRLDGCMRSWNWLNGEDSAIQETVKANTKM 465

  Fly  1341 PFFGHT---------------CQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRT 1390
            ..|..|               ..:..|:...|.|.|.      |...|||            ||.
Mouse   466 QCFSVTERGSFFPGNGFATYRLNYTRTSLDVGTETTW------EVKVVAR------------IRP 512

  Fly  1391 REPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIE 1455
            ...||.:..|..|....|.......|.:.|....:|:|   .:....|..:...|:.:...|.:.
Mouse   513 ATDTGVLLALVGDDDVVPISVALVDYHSTKKLKKQLVV---LAVEDVALALMEIKVCDSQEHTVT 574

  Fly  1456 VVRNQTLVQVKLNGTEYFRKTLSTTGL---LDAQVLYLGGPAPTRESLLGATTEPGIIPVPGAGI 1517
            |...:....::::||: .:..:||..|   ||....:|.|...|   .:|...|..:|..|...
Mouse   575 VSLREGEATLEVDGTK-GQSEVSTAQLQERLDTLKTHLQGSVHT---YVGGLPEVSVISAPVTA- 634

  Fly  1518 PIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDRASVLP 1582
                            :::|.:                      .::||.|.|   .:|.||...
Mouse   635 ----------------FYRGCM----------------------TLEVNGKIL---DLDTASYKH 658

  Fly  1583 GEVSDDLC 1590
            .:::...|
Mouse   659 SDITSHSC 666

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.