DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crb and Fbn2

DIOPT Version :9

Sequence 1:NP_001247284.1 Gene:crb / 42896 FlyBaseID:FBgn0259685 Length:2253 Species:Drosophila melanogaster
Sequence 2:NP_034311.2 Gene:Fbn2 / 14119 MGIID:95490 Length:2907 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crbNP_001247284.1 LamG 91..228 CDD:238058
EGF_CA 386..423 CDD:238011
EGF_CA 425..460 CDD:238011
EGF 466..495 CDD:278437
EGF 605..633 CDD:278437
EGF_CA 716..750 CDD:238011
EGF_CA 753..789 CDD:238011
EGF_CA 792..828 CDD:238011
EGF_CA 830..865 CDD:238011
EGF_CA 868..905 CDD:238011
EGF_CA 907..943 CDD:238011
EGF_CA 1009..1045 CDD:238011
EGF_CA 1047..1082 CDD:238011
Laminin_G_1 1155..1290 CDD:278483
EGF 1316..1346 CDD:278437
Laminin_G_1 1388..1550 CDD:278483
EGF_CA <1593..1622 CDD:238011
Laminin_G_2 1692..1828 CDD:280389
EGF_CA 1901..1937 CDD:238011
EGF_CA 1939..1974 CDD:238011
EGF_CA 2057..2094 CDD:238011
EGF_CA 2096..2133 CDD:238011
EGF_CA 2137..2175 CDD:238011
Fbn2NP_034311.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..58
Interaction with MFAP4. /evidence=ECO:0000250|UniProtKB:P35556 149..359
TB 225..258 CDD:279073
EGF_CA 276..>306 CDD:214542
TB 375..412 CDD:279073
EGF_CA 528..558 CDD:214542
EGF_CA 568..609 CDD:214542
EGF_CA 610..642 CDD:238011
cEGF 631..654 CDD:289433
EGF_CA 651..691 CDD:214542
TB 708..744 CDD:279073
cEGF 783..806 CDD:289433
EGF_CA 803..838 CDD:238011
TB 900..>928 CDD:279073
TB 1005..1040 CDD:279073
EGF_CA 1108..1142 CDD:214542
EGF_CA 1151..1183 CDD:214542
EGF_CA 1193..1225 CDD:214542
cEGF 1216..1238 CDD:289433
FXa_inhibition 1239..1274 CDD:291342
Plasmod_Pvs28 1286..1439 CDD:283826
EGF_3 1364..1399 CDD:289699
EGF_3 1405..1440 CDD:289699
EGF_CA 1484..1519 CDD:214542
EGF_CA 1525..1556 CDD:214542
TB 1586..1621 CDD:279073
EGF_CA 1643..1675 CDD:214542
cEGF 1665..1688 CDD:289433
Interaction with MFAP4. /evidence=ECO:0000250|UniProtKB:P35556 1728..2164
TB 1742..1779 CDD:279073
EGF_CA 1801..1833 CDD:214542
vWFA <1840..1881 CDD:294047
vWFA <1880..1922 CDD:294047
EGF_CA 1927..1961 CDD:214542
EGF_CA 1966..2008 CDD:214542
EGF_CA 2049..2089 CDD:214542
TB 2106..2143 CDD:279073
EGF_CA 2164..2205 CDD:214542
EGF_CA 2206..2245 CDD:214542
vWFA <2244..2283 CDD:294047
TB 2390..2425 CDD:279073
vWFA <2482..2522 CDD:294047
vWFA <2520..2556 CDD:294047
EGF_CA 2607..>2636 CDD:214542
Cadherin_repeat <2821..>2868 CDD:206637
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11389
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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