DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crb and Fbn1

DIOPT Version :9

Sequence 1:NP_001247284.1 Gene:crb / 42896 FlyBaseID:FBgn0259685 Length:2253 Species:Drosophila melanogaster
Sequence 2:NP_032019.2 Gene:Fbn1 / 14118 MGIID:95489 Length:2873 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crbNP_001247284.1 LamG 91..228 CDD:238058
EGF_CA 386..423 CDD:238011
EGF_CA 425..460 CDD:238011
EGF 466..495 CDD:278437
EGF 605..633 CDD:278437
EGF_CA 716..750 CDD:238011
EGF_CA 753..789 CDD:238011
EGF_CA 792..828 CDD:238011
EGF_CA 830..865 CDD:238011
EGF_CA 868..905 CDD:238011
EGF_CA 907..943 CDD:238011
EGF_CA 1009..1045 CDD:238011
EGF_CA 1047..1082 CDD:238011
Laminin_G_1 1155..1290 CDD:278483
EGF 1316..1346 CDD:278437
Laminin_G_1 1388..1550 CDD:278483
EGF_CA <1593..1622 CDD:238011
Laminin_G_2 1692..1828 CDD:280389
EGF_CA 1901..1937 CDD:238011
EGF_CA 1939..1974 CDD:238011
EGF_CA 2057..2094 CDD:238011
EGF_CA 2096..2133 CDD:238011
EGF_CA 2137..2175 CDD:238011
Fbn1NP_032019.2 TB 1707..1751 CDD:366245
EGF_CA 1768..>1799 CDD:214542
EGF_CA 1810..1842 CDD:214542
EGF_CA 1932..1973 CDD:311536
EGF_CA 1975..2010 CDD:238011
EGF_CA 2015..2055 CDD:389777
TB 2072..2114 CDD:366245
EGF_CA 2129..2167 CDD:214542
EGF_CA 2168..2207 CDD:214542
TB 2358..2393 CDD:366245
vWFA <2444..2484 CDD:381780
cEGF 2467..2490 CDD:372248
EGF_CA 2487..>2518 CDD:389777
EGF_CA 2526..2568 CDD:214542
EGF_CA 2569..>2598 CDD:214542
EGF_CA 2609..2640 CDD:214542
Fibrillin_U_N 48..82 CDD:375622
TB 194..>228 CDD:366245
EGF_CA 246..>276 CDD:214542
EGF_CA 288..329 CDD:214542
TB 344..389 CDD:366245
EGF_CA 492..523 CDD:214542
EGF_CA 532..573 CDD:214542
EGF_CA 574..614 CDD:214542
EGF_CA 615..648 CDD:214542
TB 671..713 CDD:366245
EGF_CA 725..765 CDD:389777
EGF_CA 767..>798 CDD:214542
cEGF 789..812 CDD:372248
TB 863..>892 CDD:366245
TB 968..1011 CDD:366245
EGF_CA 1072..1106 CDD:214542
EGF_CA 1115..1151 CDD:214542
EGF_CA 1157..1192 CDD:238011
FXa_inhibition 1203..1238 CDD:373209
EGF_3 1328..1363 CDD:372403
EGF_3 1369..1404 CDD:372403
cEGF 1428..1451 CDD:372248
EGF_CA 1448..1488 CDD:214542
EGF_CA 1489..1520 CDD:214542
TB 1551..1592 CDD:366245
EGF_CA 1608..1640 CDD:214542
EGF_CA 1650..1689 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11389
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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