Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571938.2 | Gene: | jag1b / 140423 | ZFINID: | ZDB-GENE-011128-4 | Length: | 1213 | Species: | Danio rerio |
Alignment Length: | 1161 | Identity: | 298/1161 - (25%) |
---|---|---|---|
Similarity: | 427/1161 - (36%) | Gaps: | 382/1161 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 245 FGHCPLTPGPCSDHDLFTRL-----PD---NFCLNDPCMGHGTCSSSPEGYECRCTARYSGKNCQ 301
Fly 302 KDNGSPCAKNPCENGGSCLENSRGDYQCFCDPNHSGQHCETEVNIHPLCQTN-PCLNNGACVVIG 365
Fly 366 GSGALTCECPKGYAGARCEVDTDECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECD 430
Fly 431 KNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPMTCQTQQCLNGGTCLDKPIGFQCLCPPEYTGE 495
Fly 496 LCQIAPSCAQQCPIDSECVGGKCVCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPN 560
Fly 561 TLTTTTKIPPITTSRTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSC 625
Fly 626 ICASGYTGYNCQTSTGDGASALALTPINCNATNGKCLNGGTCS--MNGTHCYCAVGYSGDRCEK- 687
Fly 688 AENCSPLNCQEPMVCVQN----QCLCP---ENKVC----NQCATQPCQNGGECVDLPNGDYECKC 741
Fly 742 TRGWTGRTCGN-----------DVDECT--------------LHPKICG-NGICKNEK-GSYKCY 779
Fly 780 CTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECGSNPCSNGST 844
Fly 845 CIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCEL-NI 908
Fly 909 DECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSNITLYQMSR 973
Fly 974 ITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNCNDGIGTYTCECEPG 1038
Fly 1039 FEGTHCEINIDECDRYNPC-------QRGTCYDQIDDYDCD-CDANYGGKNCSVLLKG------- 1088
Fly 1089 -------------------CDQNPCLNGGACLP-------------------------------- 1102
Fly 1103 -------YLINEVTHLY---NCTCENGFQGDKCEKTTTLS---MVATSLISVTTEREEGYDINLQ 1154
Fly 1155 FRTTLP----NGVLAFGTTGEK-----NEPVSYILELING----------------------RLN 1188
Fly 1189 LHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANN 1244 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 12/36 (33%) | ||
EGF_CA | 425..460 | CDD:238011 | 5/34 (15%) | ||
EGF | 466..495 | CDD:278437 | 14/28 (50%) | ||
EGF | 605..633 | CDD:278437 | 9/27 (33%) | ||
EGF_CA | 716..750 | CDD:238011 | 14/33 (42%) | ||
EGF_CA | 753..789 | CDD:238011 | 13/51 (25%) | ||
EGF_CA | 792..828 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 830..865 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 868..905 | CDD:238011 | 14/36 (39%) | ||
EGF_CA | 907..943 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 7/42 (17%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 16/121 (13%) | ||
EGF | 1316..1346 | CDD:278437 | |||
Laminin_G_1 | 1388..1550 | CDD:278483 | |||
EGF_CA | <1593..1622 | CDD:238011 | |||
Laminin_G_2 | 1692..1828 | CDD:280389 | |||
EGF_CA | 1901..1937 | CDD:238011 | |||
EGF_CA | 1939..1974 | CDD:238011 | |||
EGF_CA | 2057..2094 | CDD:238011 | |||
EGF_CA | 2096..2133 | CDD:238011 | |||
EGF_CA | 2137..2175 | CDD:238011 | |||
jag1b | NP_571938.2 | MNNL | 29..102 | CDD:284966 | |
DSL | 164..226 | CDD:279722 | 7/26 (27%) | ||
EGF_CA | 293..331 | CDD:238011 | 15/41 (37%) | ||
EGF | 337..365 | CDD:278437 | 11/28 (39%) | ||
EGF_CA | 371..407 | CDD:238011 | 20/72 (28%) | ||
EGF_CA | 409..444 | CDD:238011 | 11/34 (32%) | ||
EGF_CA | 447..482 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 484..520 | CDD:238011 | 8/35 (23%) | ||
EGF_CA | 522..557 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 626..662 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | 664..699 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | <711..737 | CDD:238011 | 13/26 (50%) | ||
EGF | 745..775 | CDD:278437 | 12/29 (41%) | ||
EGF_CA | 779..814 | CDD:238011 | 13/60 (22%) | ||
EGF_CA | 817..853 | CDD:238011 | 17/35 (49%) | ||
VWC_out | 860..927 | CDD:214565 | 9/70 (13%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1181..1202 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11640 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |