DRSC/TRiP Functional Genomics Resources

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Protein Alignment crb and NOTCH2NLC

DIOPT Version :10

Sequence 1:NP_001247284.1 Gene:crb / 42896 FlyBaseID:FBgn0259685 Length:2253 Species:Drosophila melanogaster
Sequence 2:NP_001350942.1 Gene:NOTCH2NLC / 100996717 HGNCID:53924 Length:293 Species:Homo sapiens


Alignment Length:253 Identity:95/253 - (37%)
Similarity:130/253 - (51%) Gaps:20/253 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 PLTPGPCSDHDLFTRLPDNFCLN--DPCMGHGTCSS--SPEGYECRCTARYSGKNCQKDNGSPCA 309
            ||..|.|.......| |...|.:  :||:..|.|.:  :..|| |:|...:.|:.||  :..||.
Human    27 PLCCGRCWRSGCAAR-PPRMCRDGYEPCVNEGMCVTYHNGTGY-CKCPEGFLGEYCQ--HRDPCE 87

  Fly   310 KNPCENGGSCLENSR-GDYQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCE 373
            ||.|:|||:|:..:. |...|.|....:|:.|:...: ||...:.||||.|.|.:: ......|.
Human    88 KNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTS-HPCFVSRPCLNGGTCHML-SRDTYECT 150

  Fly   374 CPKGYAGARCEVDTDECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECD-KNPCLNG 437
            |..|:.|..|:. ||.|.|.||.|..:|....|.|||.|. ||:||..|:|:|:||| ...|.:|
Human   151 CQVGFTGKECQW-TDACLSHPCANGSTCTTVANQFSCKCL-TGFTGQKCETDVNECDIPGHCQHG 213

  Fly   438 GRCFDTYGWYTCQCLDGWGGEICDR-PMTCQTQQCLNGGTCLDKPIG---FQCLCPPE 491
            |.|.:..|.|.||||.|:.|:.||. .:.|....|:|||||  :..|   |:|.|.||
Human   214 GTCLNLPGSYQCQCLQGFTGQYCDSLYVPCAPSPCVNGGTC--RQTGDFTFECNCLPE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crbNP_001247284.1 LamG 91..228 CDD:238058
EGF 269..299 CDD:394967 10/33 (30%)
EGF_CA <311..341 CDD:238011 10/30 (33%)
EGF_CA 386..423 CDD:238011 17/36 (47%)
EGF_CA 425..460 CDD:238011 16/35 (46%)
EGF 466..495 CDD:394967 13/29 (45%)
EGF 605..633 CDD:394967
EGF_CA 716..750 CDD:238011
EGF_CA 753..789 CDD:238011
EGF_CA 792..828 CDD:238011
EGF_CA 830..865 CDD:238011
EGF_CA 868..905 CDD:238011
EGF_CA 907..943 CDD:238011
EGF_CA 1009..1045 CDD:238011
EGF_CA 1047..1082 CDD:238011
Laminin_G_1 1155..1290 CDD:395008
EGF 1316..1346 CDD:394967
Laminin_G_1 1388..1550 CDD:395008
EGF_CA <1593..1622 CDD:238011
Laminin_G_2 1692..1828 CDD:460494
EGF_CA 1901..1937 CDD:238011
EGF_CA 1939..1974 CDD:238011
EGF_CA 2057..2094 CDD:238011
EGF_CA 2096..2133 CDD:238011
EGF_CA 2137..2175 CDD:238011
NOTCH2NLCNP_001350942.1 EGF_CA 200..236 CDD:238011 16/35 (46%)
Blue background indicates that the domain is not in the aligned region.

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