Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012808841.2 | Gene: | svep1 / 100493788 | XenbaseID: | XB-GENE-5996067 | Length: | 3695 | Species: | Xenopus tropicalis |
Alignment Length: | 2741 | Identity: | 544/2741 - (19%) |
---|---|---|---|
Similarity: | 807/2741 - (29%) | Gaps: | 1122/2741 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 267 NFCLNDPCMGHGTCSSSPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSCLENSRGDYQCFC 331
Fly 332 DPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDECASQPCQ 396
Fly 397 NNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRCFDTYGWYTCQCLDGWGGEICD 461
Fly 462 RPM-TCQTQQCLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQQCP----IDSECVGGKCVCK 521
Fly 522 PGSSGPIGHCLPTTTTPTPE--------QEPTTTPRTTP------------------NPNPAIPN 560
Fly 561 TLTTTTKIPPITTSR------TLV-------------------GTTTGSRRPPQQPL---QSPTQ 597
Fly 598 RSASLN-----------------------------ACPQENCLNGGTCLGYS------------G 621
Fly 622 NYSCICASGYTGYNCQTSTGDGASALALTPINCNATNGKCLNGGTCSMNGTHCYCAVGYS----- 681
Fly 682 -------GDRCEKAENCSPLNCQEPMVCVQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYEC 739
Fly 740 KCT--RGWTG--RTCGNDVDECTLHPKICGNGICKNEKGSYKCYCTPGFTG--------VHCDS- 791
Fly 792 -------------DVDECLSFPCLNGATCHNKINAYECVCQPGYEGEN----CEVDIDECGSNPC 839
Fly 840 SNGSTCIDRINNFT--------CN------------------------------C---------- 856
Fly 857 --IPGMTGR-------------------ICD-----------IDIDDCVGDPCLNGGQCIDQLGG 889
Fly 890 ---------FRC------------DCSGTGYEGENCELNIDECLSNPCTNGAKCLDRVKDY---- 929
Fly 930 -----FCD-----CHNGYKGKNCEQDINECESNPCQYNG----NCL----ERSNITLYQMSRITD 976
Fly 977 LPK-VFSQPFSFENASGY--------ECV----CVPGIIGKNCEININECDSNPCSKHG---NCN 1025
Fly 1026 DGIGTYTC-ECEPGF-----EGTHCEINIDECDRYNPCQRGTC------------------YDQI 1066
Fly 1067 DDYDCD------------CDAN---YGGKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTC 1116
Fly 1117 ENGFQ--GDKCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSY- 1178
Fly 1179 ----ILELIN--GRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVG 1237
Fly 1238 SYETANNSQPSFPRTYLGGTI----------------------------PNLKSY---------- 1264
Fly 1265 ----LRHLTHQPSAFVGCMQDI---------------------------------MVNGKWIFPD 1292
Fly 1293 EQDAN----ISYT-----KLE--NVQSGCPRTEQCKPNP-------CH-----SNG--ECTDLWH 1332
Fly 1333 ----TFACHCPRPFFG------HTCQHNMTAAT----------------FGHENTTHSAVIVETT 1371
Fly 1372 DVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNIGD-SYVAAKLHGGELLVKMQFSGT 1435
Fly 1436 PEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLNGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESL 1500
Fly 1501 LGATTEPGIIPVPGAGIPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSLNLIVEMYSLNV--TDV 1563
Fly 1564 QVNAKPLGAVTIDRASVLPGEVSDDLCRKNPCLHNAECRNTWND-------YTCKCPN----GYK 1617
Fly 1618 GKNCQEIEFCQHVTCPGQSLCQNLDDGYE--------CVTNTTFTGQE---------RSPLAFFY 1665
Fly 1666 FQEQQSDDIVSEASPKQTLKPVIDIAFRTRAGGTLLYIDNVDGFFEIG----------------- 1713
Fly 1714 --VNGGRVTITW---------------------KLSALHFGESARFEKENTDGEW---------- 1745
Fly 1746 --------SRIYLRAHNSK------------------------LEGGWKGWESMVDPTPAFSTDI 1778
Fly 1779 DQAAFQSLIATSTQVYLGGMPESRQARG------STLSAQQ----GSQFKGCVGEARVGDLLLPY 1833
Fly 1834 FSMAELYSRTNVSVQQKAQFRLNATRPEEGCILCFQSD--CKNDGFCQSP--------------- 1881
Fly 1882 ------SDEYA------CTCQPGF--------------------------------------EGD 1896
Fly 1897 DCGTDIDECL--------------NTECLNNGTCINQVAAFFC---------------------- 1925
Fly 1926 -------QCQPGFE-----GQHCEQN------IDECADQPCH------NG-----GNCTDLIASY 1961
Fly 1962 VCDCPEDYMGPQ---CDVLKQM-----TCENEPCRNGSTCQNGFNASTGN----NFTCTCVPGFE 2014
Fly 2015 --GP---LC--------DIPFCEITPC------DNGGL---CLTTGAVPMCKCSLGYTGRLCEQD 2057
Fly 2058 INE-------------CESNPC-------QNG---------GQ-----CK---DLVGR--YECDC 2083
Fly 2084 QGTGFE-GIRCENDIDECNMEGDYCGGLGR-------------CFN---KPGSFQCICQK----- 2126
Fly 2127 --PYCGAYCNFTDPC---------NATDL-----------------CSNGGRCVESCGAKPDYYC 2163
Fly 2164 ECPEGFAGKNC 2174 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 19/36 (53%) | ||
EGF_CA | 425..460 | CDD:238011 | 14/34 (41%) | ||
EGF | 466..495 | CDD:278437 | 11/28 (39%) | ||
EGF | 605..633 | CDD:278437 | 9/39 (23%) | ||
EGF_CA | 716..750 | CDD:238011 | 9/37 (24%) | ||
EGF_CA | 753..789 | CDD:238011 | 15/43 (35%) | ||
EGF_CA | 792..828 | CDD:238011 | 8/39 (21%) | ||
EGF_CA | 830..865 | CDD:238011 | 12/103 (12%) | ||
EGF_CA | 868..905 | CDD:238011 | 10/57 (18%) | ||
EGF_CA | 907..943 | CDD:238011 | 10/49 (20%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 8/44 (18%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 10/67 (15%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 29/216 (13%) | ||
EGF | 1316..1346 | CDD:278437 | 11/53 (21%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 24/162 (15%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 11/39 (28%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 37/227 (16%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 13/83 (16%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 11/54 (20%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 14/76 (18%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 11/59 (19%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 17/64 (27%) | ||
svep1 | XP_012808841.2 | vWFA_subfamily_ECM | 74..236 | CDD:238727 | |
Ephrin_rec_like | 302..352 | CDD:311571 | |||
PHA02927 | <365..550 | CDD:222943 | |||
CCP | 430..486 | CDD:153056 | |||
HYR | 552..634 | CDD:367105 | |||
DUF5011 | 646..716 | CDD:383419 | |||
Ephrin_rec_like | 1008..1055 | CDD:311571 | |||
Ephrin_rec_like | 1062..1109 | CDD:311571 | |||
Ephrin_rec_like | 1116..1163 | CDD:311571 | |||
EGF_CA | 1198..1232 | CDD:238011 | 14/33 (42%) | ||
EGF_CA | 1235..1270 | CDD:238011 | 11/36 (31%) | ||
EGF_CA | 1272..1308 | CDD:238011 | 16/40 (40%) | ||
EGF_CA | 1311..1346 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 1348..1384 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 1386..1422 | CDD:238011 | 12/35 (34%) | ||
LamG | 1422..1625 | CDD:389952 | 32/221 (14%) | ||
Sushi | 1631..1688 | CDD:365861 | 13/75 (17%) | ||
CCP | 1693..1746 | CDD:214478 | 13/57 (23%) | ||
EGF_CA | 1748..1786 | CDD:214542 | 14/37 (38%) | ||
PHA02927 | <1791..1961 | CDD:222943 | 24/176 (14%) | ||
PHA02639 | 1904..>2082 | CDD:165022 | 30/189 (16%) | ||
PHA02927 | 2081..2322 | CDD:222943 | 49/259 (19%) | ||
PHA02817 | 2321..>2439 | CDD:165167 | 21/138 (15%) | ||
PHA02927 | 2404..2612 | CDD:222943 | 36/214 (17%) | ||
PHA02927 | 2518..2773 | CDD:222943 | 68/369 (18%) | ||
CCP | 2777..2830 | CDD:214478 | 14/61 (23%) | ||
PHA02927 | 2830..3061 | CDD:222943 | 40/260 (15%) | ||
CCP | 3066..3119 | CDD:214478 | 13/60 (22%) | ||
PHA02927 | 3119..3355 | CDD:222943 | 35/235 (15%) | ||
PHA02927 | 3257..3470 | CDD:222943 | 51/214 (24%) | ||
PHA02927 | 3366..3586 | CDD:222943 | 51/223 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |