Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031747134.1 | Gene: | ltbp4 / 100488208 | XenbaseID: | XB-GENE-992148 | Length: | 1805 | Species: | Xenopus tropicalis |
Alignment Length: | 2230 | Identity: | 432/2230 - (19%) |
---|---|---|---|
Similarity: | 622/2230 - (27%) | Gaps: | 1097/2230 - (49%) |
- Green bases have known domain annotations that are detailed below.
Fly 313 CENGGSCLENSRGDYQCFCDPNHSGQHC------------------------------------- 340
Fly 341 -------------------ETEVNIH---------------------------PL----CQTNPC 355
Fly 356 LN----------------NGAC------------------VVIGGSGALTCECPKGYAGARCEVD 386
Fly 387 TDECASQPCQN-----NGSCIDRINGFSCDCSGTGYTGAFCQTNVDEC-DKNPCLNGGRCFDTYG 445
Fly 446 WYTCQCLDGWGGEICDRP-MTCQTQ-----------QCLNGGTC-----------------LDKP 481
Fly 482 IGFQC-LCPP---EYTGELCQIAPS---CAQQCPIDSECVGGKCVCKPGSSGPIGHCLP-TTTTP 538
Fly 539 ---------TPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTTTGSRRPPQQPL-- 592
Fly 593 --QSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALALTPINCN 655
Fly 656 ATNGKCLNGGTCSMNGTHCYCAVGYSGDRCEKAENCSPLNCQEPMVCVQNQCLCPENKVCNQCAT 720
Fly 721 QPCQNGGECVDLPNGDYECKCTRGWT----GRTCGNDVDECTLHPKICGNGICKNEKGSYKCYCT 781
Fly 782 PGFT----GVHCDSDVDECLSFP---CLNGATCHNKINAYECVCQPGY----EGENCEVDIDECG 835
Fly 836 SNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGY- 899
Fly 900 ---EGENCELNIDECLSNP--CTNGAKCLDRVKDYFC-DCHNGYKGKN--CEQDINECES-NPCQ 955
Fly 956 YNGNCLERSNITLYQMSRITDLPKVFSQPFSFENASG-YECVCVPG--IIGKNCEININEC-DSN 1016
Fly 1017 PCSKHGNCNDGIGTYTCECEPGF----EGTHCEINIDECDRYNPCQRGTCYDQIDDYDCDCDANY 1077
Fly 1078 GGKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISVT 1142
Fly 1143 TEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGVFIGSKLN 1207
Fly 1208 DSNWHKVFVAINTSHLVLSANDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNLKSYLRHLTHQP 1272
Fly 1273 SAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGECTDLWHTFACH 1337
Fly 1338 CPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRTREPTGQVFYLGT 1402
Fly 1403 DPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKL 1467
Fly 1468 NGTEYFRKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEADDSR 1532
Fly 1533 DYFKGIIQDVKVSNGSLNLIVEMYSLNVTDVQVNAKPLGAVTIDRASVLPGEVSDDLCRKNPCLH 1597
Fly 1598 NAECRNTWNDYTCKCPNGYKG----KNCQEIEFC---QHVTCPGQSLCQNLDDGYECVTNTTFTG 1655
Fly 1656 QERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRTRAGGTLLYIDNVDGFFEIGVNGGRVT 1720
Fly 1721 ITWKLSALHFGESARFEKENTDGEWSRIYLRAHNSKLEGG---------------WKGWESMVDP 1770
Fly 1771 TPAFSTDIDQAAFQSLIATSTQVYLGGMPESRQARGSTLSAQQGSQFKGCVGEARV-GDLLLPYF 1834
Fly 1835 SMAELYSRTNVSVQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGD--- 1896
Fly 1897 -DCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGF----EGQHCEQNIDECADQPCHNGGNC-T 1955
Fly 1956 DLIASYVCDCPEDYMGPQCDVLKQMTCENEPCRN--------------------GSTCQNGFNAS 2000
Fly 2001 TGNNFTCTCVPG------------------------FEGPLCDI--PFCEITPCDNGGLCLTTGA 2039
Fly 2040 VPMCKCSLGYTGR-----------------------------------LCEQDINECESNPCQNG 2069
Fly 2070 GQCKDLVGRYECDCQG----------------------------------TGFEGIRCENDIDEC 2100
Fly 2101 NMEGDYCGGL-----GRCFNKPGSFQCICQKPYCGAYCNFT-------DPCNATD----LCSNGG 2149
Fly 2150 RCVESCGAKPDYYCECPEGF 2169 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | 9/41 (22%) | ||
EGF_CA | 425..460 | CDD:238011 | 15/35 (43%) | ||
EGF | 466..495 | CDD:278437 | 11/60 (18%) | ||
EGF | 605..633 | CDD:278437 | 10/27 (37%) | ||
EGF_CA | 716..750 | CDD:238011 | 6/37 (16%) | ||
EGF_CA | 753..789 | CDD:238011 | 19/39 (49%) | ||
EGF_CA | 792..828 | CDD:238011 | 16/42 (38%) | ||
EGF_CA | 830..865 | CDD:238011 | 6/34 (18%) | ||
EGF_CA | 868..905 | CDD:238011 | 10/40 (25%) | ||
EGF_CA | 907..943 | CDD:238011 | 15/40 (38%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 13/40 (33%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 9/34 (26%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 8/134 (6%) | ||
EGF | 1316..1346 | CDD:278437 | 6/29 (21%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 16/161 (10%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 10/32 (31%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 28/151 (19%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 13/39 (33%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 7/35 (20%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 12/70 (17%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 11/41 (27%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 12/37 (32%) | ||
ltbp4 | XP_031747134.1 | EGF_CA | 492..>522 | CDD:214542 | 15/52 (29%) |
TB | 553..595 | CDD:395554 | 9/41 (22%) | ||
cEGF | 727..750 | CDD:403760 | 10/61 (16%) | ||
EGF_CA | 747..787 | CDD:311536 | 15/72 (21%) | ||
EGF_CA | 789..830 | CDD:214542 | 20/41 (49%) | ||
EGF_CA | 831..872 | CDD:311536 | 16/41 (39%) | ||
EGF_CA | 874..914 | CDD:311536 | 18/77 (23%) | ||
EGF_CA | 916..955 | CDD:214542 | 16/41 (39%) | ||
EGF_CA | 956..996 | CDD:214542 | 16/66 (24%) | ||
EGF_CA | 997..1038 | CDD:214542 | 14/41 (34%) | ||
EGF_CA | 1039..1070 | CDD:214542 | 9/44 (20%) | ||
EGF_CA | 1124..1165 | CDD:238011 | 15/158 (9%) | ||
EGF_CA | 1210..1245 | CDD:238011 | 12/57 (21%) | ||
TB | 1333..1374 | CDD:395554 | 10/44 (23%) | ||
EGF_CA | 1431..>1459 | CDD:214542 | 12/27 (44%) | ||
TB | 1495..1536 | CDD:395554 | 7/49 (14%) | ||
PHA03247 | <1543..1695 | CDD:223021 | 28/165 (17%) | ||
EGF_CA | 1757..1796 | CDD:214542 | 12/39 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 52 | 1.000 | Domainoid score | I11238 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |