Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937280.2 | Gene: | crb2 / 100487355 | XenbaseID: | XB-GENE-989701 | Length: | 1456 | Species: | Xenopus tropicalis |
Alignment Length: | 1899 | Identity: | 566/1899 - (29%) |
---|---|---|---|
Similarity: | 787/1899 - (41%) | Gaps: | 583/1899 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 465 TCQTQQCLNGGTCLDKPIGFQCLCPPE---YTGELC-QIAPSCA-QQCPIDSECVGG------KC 518
Fly 519 VCKPGSSGPIGHCLPTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTTTG 583
Fly 584 SRRPPQQPLQSPTQRSASLNACPQEN--CLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASA 646
Fly 647 LALTPINCNATNGKCLNGGTCSMNGTHCYCAVGYSGDRCEKAENCSPLNCQEPMVCVQNQCLCPE 711
Fly 712 NKVCNQCATQPCQNGGECVDLPNGD-YECKCTRGWTGRTCGNDVDECTLHPKICGN-GICKNEKG 774
Fly 775 SYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECGSNPC 839
Fly 840 SNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENC 904
Fly 905 ELNIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSNITLY 969
Fly 970 QMSRITDLPKVFSQP----FSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNCNDGIGT 1030
Fly 1031 YTCECEPGFEGTHCEINIDECDRYNPCQRG-TCYDQIDDYDCDC-----DAN-YGGKNCSVLLKG 1088
Fly 1089 CDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISVTTE-REEGYDIN 1152
Fly 1153 L--QFRTTLPNGVLAFGTTGEKNEPVSYI-LELINGRLNLHSSLLNKWEG-----VFIGSKLNDS 1209
Fly 1210 NWHKVFV-AINTSHLVLSA--ND------EQAIFPVGSYETANNSQP----SFPRTYLGGTIPNL 1261
Fly 1262 KSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLENVQSGCPRTEQCKPNPCHSNGE 1326
Fly 1327 CTDLWHTFACHCPRPFFGHTCQHNMTAATFGHENTTHSAVIVETTDVARRAIRSILDISMFIRTR 1391
Fly 1392 EPTGQVFYLGTDPRKAPTKNIGDSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIEV 1456
Fly 1457 VRNQTLVQVK--LNGTEYF------RKTLSTTGLLDAQVLYLGGPAPTRESLLGATTEPGIIPVP 1513
Fly 1514 G-----AGIPIEDTTVPKEADDSRDYFKGIIQDVKVSNGSL--------NLIVEMYSLNVTDVQV 1565
Fly 1566 NAKPLGAVTIDRASVLPGEVSDDLCRKNPCLHNAECRNTWNDYTCKCPNGYKGKNCQEIEFCQHV 1630
Fly 1631 TCPGQSLCQNLDDGYECVTNTTFTGQERSPLAFFYFQEQQSDDIVSEASPKQTLKPVIDIAFRTR 1695
Fly 1696 -------------------AGGTLLYID-----NVDGFFEIGVNGGRVTITWKLSALHFGESARF 1736
Fly 1737 EKENTDGEWSRIYLRAHN-SKLEGGWKGWESMVDPTPAFSTDID-QAAFQ------SLIATSTQV 1793
Fly 1794 YLGGMPESRQARGSTLSAQQGSQFKGCVGEARVGDLLLPYFSMAELYSRTNVSVQQKAQFRLNAT 1858
Fly 1859 RPEEGC---ILCFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECLNTECLNNGTCINQV 1920
Fly 1921 AAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIASYVCDCPEDYMGPQCDVLKQMTCENE 1985
Fly 1986 PCRNGSTCQNGFNASTGN-NFTCTCVPGFEGPLCDIPFCEITPCDNGGLCLTTGAVPMCKCSLGY 2049
Fly 2050 TGRLCEQDINECESNPCQNGGQCKDLVGRYECDCQGTGFEGIRCENDIDECNMEGDYCGGLGRCF 2114
Fly 2115 NKPGSFQCICQKPYCGAYCNFTDPCNATDLCSNGGRCVESCGAKPDYYCECPEGFAGKNCTAPIT 2179
Fly 2180 AKEDGPSTTDIAI--IVIPVV--VVLLLIAGALLGTFLVM-ARNKRATRGTYSPSAQEYCNPRLE 2239
Fly 2240 MDNVLKPPPEERLI 2253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | |
EGF_CA | 386..423 | CDD:238011 | |||
EGF_CA | 425..460 | CDD:238011 | |||
EGF | 466..495 | CDD:278437 | 16/31 (52%) | ||
EGF | 605..633 | CDD:278437 | 10/29 (34%) | ||
EGF_CA | 716..750 | CDD:238011 | 13/34 (38%) | ||
EGF_CA | 753..789 | CDD:238011 | 14/36 (39%) | ||
EGF_CA | 792..828 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 830..865 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 868..905 | CDD:238011 | 21/36 (58%) | ||
EGF_CA | 907..943 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 18/41 (44%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 45/153 (29%) | ||
EGF | 1316..1346 | CDD:278437 | 17/29 (59%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | 41/182 (23%) | ||
EGF_CA | <1593..1622 | CDD:238011 | 12/28 (43%) | ||
Laminin_G_2 | 1692..1828 | CDD:280389 | 32/167 (19%) | ||
EGF_CA | 1901..1937 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1939..1974 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 2057..2094 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 2096..2133 | CDD:238011 | 0/36 (0%) | ||
EGF_CA | 2137..2175 | CDD:238011 | 0/37 (0%) | ||
crb2 | XP_002937280.2 | EGF_CA | <149..178 | CDD:238011 | 14/46 (30%) |
EGF_CA | 180..216 | CDD:238011 | 15/37 (41%) | ||
EGF_CA | 218..254 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 257..292 | CDD:238011 | 19/34 (56%) | ||
EGF_CA | 294..331 | CDD:238011 | 21/36 (58%) | ||
EGF_CA | 336..369 | CDD:238011 | 16/32 (50%) | ||
EGF_CA | 428..463 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 466..>494 | CDD:214542 | 14/28 (50%) | ||
Laminin_G_2 | 582..712 | CDD:366983 | 44/147 (30%) | ||
EGF_CA | 742..771 | CDD:238011 | 16/28 (57%) | ||
Laminin_G_2 | 807..921 | CDD:366983 | 39/168 (23%) | ||
EGF_CA | <961..990 | CDD:238011 | 12/28 (43%) | ||
Laminin_G_2 | 1046..1160 | CDD:366983 | 32/165 (19%) | ||
EGF_CA | 1196..1227 | CDD:238011 | 10/30 (33%) | ||
EGF_CA | 1229..1264 | CDD:238011 | 12/35 (34%) | ||
EGF_CA | 1266..1302 | CDD:238011 | 16/39 (41%) | ||
EGF_CA | 1345..1381 | CDD:238011 | 18/36 (50%) | ||
Insulin_TMD | <1396..1427 | CDD:375394 | 12/33 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 62 | 1.000 | Domainoid score | I10176 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H134710 | |
Inparanoid | 1 | 1.050 | 762 | 1.000 | Inparanoid score | I548 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D111153at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003041 | |
OrthoInspector | 1 | 1.000 | - | - | otm47837 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4671 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.970 |