Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002931784.1 | Gene: | jag1 / 100486874 | XenbaseID: | XB-GENE-485662 | Length: | 1218 | Species: | Xenopus tropicalis |
Alignment Length: | 1415 | Identity: | 366/1415 - (25%) |
---|---|---|---|
Similarity: | 523/1415 - (36%) | Gaps: | 489/1415 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 111 SAISFRSCRGGEILAQQYNKNSIVISVLNDFLQISLA--------------------GPAVHGPN 155
Fly 156 NRLDVKLPYQLLDNRWHTLQFKYE----------YGNLYLHVDRAASIFANSTYNSQFLTNQDIG 210
Fly 211 YKDAILILGNSFS---------------------GCLLD--------GPGLQFVNNSTVQNVVFG 246
Fly 247 HCPLTPGP-CSDH------DLFTRLPDNF-------------CLNDPCMG--------------- 276
Fly 277 HGTCSSSPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSCLENSRGDYQCFCDPNHSGQHCE 341
Fly 342 TEVNIHPLCQT-NPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDECASQPCQNNGSCIDRI 405
Fly 406 NGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPMTCQTQQ 470
Fly 471 CLNGGTCLDKPIGFQCLCPPEYTGELCQIAPSCAQQCPIDSECVGGKCVCKPGSSGPIGHCLPTT 535
Fly 536 TTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTTTGSRRPPQQPLQSPTQRSA 600
Fly 601 SLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALALTPINCNATNGKCLNGG 665
Fly 666 TCS--MNGTHCYCAVGYSGDRCEKAEN-C--SP-LN---CQEPMVCVQN--QCLCP---ENKVC- 715
Fly 716 ---NQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHP---------------- 761
Fly 762 ---------KICG-NGICKNEK-GSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHNKINAYE 815
Fly 816 CVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNG 880
Fly 881 GQCIDQLGGFRCDCSGTGYEGENCEL-NIDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQ 944
Fly 945 DINECESNPCQYNGNCLERSNITLYQMSRITDLPKVFSQPFSFENASGYECVCVPGIIGKNCEIN 1009
Fly 1010 INECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPC-------QRGTCYDQID 1067
Fly 1068 DYDCD-CDANYGGKNCSVLLKG---CD---QNPCLNGGACLPYLINEVTHLYNCTCENGFQGD-- 1123
Fly 1124 ---------KCEKTTTLSMVATSLISVTTEREEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYI 1179
Fly 1180 LELINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDE-----------QAI 1233
Fly 1234 FPVGSYETANNSQPSFPRTYL--------------GGT---IPNLKSYLRHLTHQPSAFVGCMQD 1281
Fly 1282 IMVNGKW-IFPDEQDANISYTKLENVQSGCPRTE--QCKPNPCHSNGECT 1328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | 26/167 (16%) |
EGF_CA | 386..423 | CDD:238011 | 15/36 (42%) | ||
EGF_CA | 425..460 | CDD:238011 | 8/34 (24%) | ||
EGF | 466..495 | CDD:278437 | 11/28 (39%) | ||
EGF | 605..633 | CDD:278437 | 9/27 (33%) | ||
EGF_CA | 716..750 | CDD:238011 | 13/33 (39%) | ||
EGF_CA | 753..789 | CDD:238011 | 14/62 (23%) | ||
EGF_CA | 792..828 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 830..865 | CDD:238011 | 16/34 (47%) | ||
EGF_CA | 868..905 | CDD:238011 | 13/36 (36%) | ||
EGF_CA | 907..943 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1047..1082 | CDD:238011 | 9/42 (21%) | ||
Laminin_G_1 | 1155..1290 | CDD:278483 | 32/163 (20%) | ||
EGF | 1316..1346 | CDD:278437 | 5/13 (38%) | ||
Laminin_G_1 | 1388..1550 | CDD:278483 | |||
EGF_CA | <1593..1622 | CDD:238011 | |||
Laminin_G_2 | 1692..1828 | CDD:280389 | |||
EGF_CA | 1901..1937 | CDD:238011 | |||
EGF_CA | 1939..1974 | CDD:238011 | |||
EGF_CA | 2057..2094 | CDD:238011 | |||
EGF_CA | 2096..2133 | CDD:238011 | |||
EGF_CA | 2137..2175 | CDD:238011 | |||
jag1 | XP_002931784.1 | MNNL | 32..107 | CDD:369454 | 9/80 (11%) |
DSL | 167..229 | CDD:366627 | 13/64 (20%) | ||
EGF_CA | 296..334 | CDD:238011 | 16/41 (39%) | ||
EGF | 340..370 | CDD:333761 | 15/30 (50%) | ||
EGF_CA | 374..410 | CDD:238011 | 20/72 (28%) | ||
EGF_CA | 412..447 | CDD:238011 | 12/34 (35%) | ||
EGF_CA | 450..485 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 487..523 | CDD:238011 | 13/39 (33%) | ||
EGF_CA | 525..560 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 629..665 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 667..702 | CDD:238011 | 16/34 (47%) | ||
EGF | 709..739 | CDD:333761 | 13/30 (43%) | ||
EGF | 748..778 | CDD:333761 | 13/29 (45%) | ||
EGF_CA | 782..817 | CDD:238011 | 13/60 (22%) | ||
EGF_CA | 820..856 | CDD:238011 | 17/35 (49%) | ||
VWC_out | 863..929 | CDD:214565 | 18/72 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |