DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uck and B0001.4

DIOPT Version :9

Sequence 1:NP_001138105.1 Gene:Uck / 42894 FlyBaseID:FBgn0263398 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_502304.2 Gene:B0001.4 / 178160 WormBaseID:WBGene00007089 Length:248 Species:Caenorhabditis elegans


Alignment Length:213 Identity:104/213 - (48%)
Similarity:147/213 - (69%) Gaps:3/213 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VKSPFLIGVAGGTASGKSTVCKKIMEQL-GQAEMDHTQRQVVSISQDSFYRELTPAEKAKAQKGL 87
            :|.|.||||||||:.||||:.::|:|.| ..|:....|..:|.:|..||||||:..||..|::|.
 Worm     5 LKLPLLIGVAGGTSCGKSTIVERIIENLNANAKQSGRQIDIVHLSLHSFYRELSAEEKILAREGK 69

  Fly    88 FNFDHPDAFNEELMYSTLQNILKGHKVEIPSYDYRTNSLDFENVLVIYPADVVLFEGILVFYFPK 152
            |||||||..|.:|:..||||::.|..||||.||..|:|::  ..:.:.||.|::.||||:.|..:
 Worm    70 FNFDHPDQINFDLLAETLQNMIDGKTVEIPKYDMITSSMN--GTVTVEPAKVIIIEGILLLYDER 132

  Fly   153 IRELFHMKLFVDTDSDTRLARRVPRDINERGRDLDAVLTQYMTFVKPAFEEFCSPTKKFADVIIP 217
            :|:|...||||:.::::||..|:...|.:..|...:::.||..||||||||||.||||:||||||
 Worm   133 VRKLLSTKLFVEKNAESRLRNRLATYIRDYHRAPLSIIRQYTEFVKPAFEEFCRPTKKYADVIIP 197

  Fly   218 RGADNTVAIDLIVQHIRD 235
            |||||.||.|||.:::::
 Worm   198 RGADNHVATDLIAKNLQE 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UckNP_001138105.1 UMPK 29..235 CDD:238981 102/206 (50%)
B0001.4NP_502304.2 Udk 1..223 CDD:223645 104/213 (49%)
UMPK 10..216 CDD:238981 102/208 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158692
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0572
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 202 1.000 Inparanoid score I2459
Isobase 1 0.950 - 0 Normalized mean entropy S1209
OMA 1 1.010 - - QHG61683
OrthoDB 1 1.010 - - D509086at33208
OrthoFinder 1 1.000 - - FOG0002695
OrthoInspector 1 1.000 - - oto20415
orthoMCL 1 0.900 - - OOG6_100147
Panther 1 1.100 - - LDO PTHR10285
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.720

Return to query results.
Submit another query.