DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and OCT2

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_178054.1 Gene:OCT2 / 844274 AraportID:AT1G79360 Length:527 Species:Arabidopsis thaliana


Alignment Length:563 Identity:120/563 - (21%)
Similarity:212/563 - (37%) Gaps:91/563 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEESMKDLLTKQLEVVGSGGAFVWAIFFLCVTPNILNGFHVSSYTLLGHLPDDQWCGIPELQDTN 80
            |..|:.|.:...:      |:|.||.|......: .:|...:..|.:....|         .:..
plant    16 SPRSLDDTIESYI------GSFGWAQFLQAALVS-FSGVFDAQQTFISVFTD---------SEPT 64

  Fly    81 WTHAQKREIVAKGLDSGGC----TVWDWNYGHLAKMSYEAALNYTGHLTQISPPAEVSCRVKGQH 141
            |.......|..:.: |..|    |.|.|:|.                                  
plant    65 WHCTDSNSICHESI-SNICILPKTAWSWDYS---------------------------------- 94

  Fly   142 EFAHPETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILAD-KFGRKSSFTLGAAFFIVG 205
                |..:.:::|.|.|..|..:...:.|..:|...|......||| ..|||:...|......:.
plant    95 ----PHVSVISEWGLQCAGSFVKGLPESSFFVGCLIGGLVLSTLADSSLGRKNMLFLSCLVMAIS 155

  Fly   206 SFFCTFSPWYSLFLAGRFALGAASSGLFYPAFTMIVENICLKHRSWMSIAFSASYPVGMIILAIV 270
            :....|||...::...||..|...:.:...|..:..|.:..|.|..:.|.....:.:|.:.|.::
plant   156 TMLTVFSPNIWVYAVLRFVNGFGRATIGTCALVLSTELVGKKWRGRVGIMSFFGFMLGFLSLPLM 220

  Fly   271 GYVIQ--PWRHLQLALTIPSLL-LILNCYLMSESPRWLITNQRYDRVYKILFRQPSHYQIQPA-- 330
            .|:.:  .||.|....:||::: .:|..:.:.||||||....|.:....||.|..|    .|:  
plant   221 AYMNRGSSWRILYAWTSIPTIIYCVLVRFFVCESPRWLFVRGRREEAISILKRVAS----IPSTD 281

  Fly   331 VAAPSQVASDKKSLEPEEGFSFGQKLKNGPLKSIIELYANSKV--------RRMIFASYFMFCVT 387
            |::...::....||..||.       :..| .:.:.::...||        :|:.......|.: 
plant   282 VSSGGAISMSFSSLPFEED-------EEKP-STNVNIFTTMKVLVEKRWALKRLSAVMAIAFGI- 337

  Fly   388 SLSYYVTALNAANLSVSRYLYIIGTGLVDIPSYLVPVIMLRFTGRRLTTMFLFLWTGVSLLLVLA 452
            .|.||...|..:||..:.||......|:|:|:.|:.:.::....||...:......|||.:|:.|
plant   338 GLVYYGMPLALSNLDFNIYLSAAFNALMDLPANLITLFLVDKLSRRNALIGFTALGGVSSVLIFA 402

  Fly   453 VP----AGSTTWIVAFAMLGRFGISATYSVVTLYTAELYPTQIRNSALGTCSTFAHVGSISAPYV 513
            :.    .......:|..::..|...:.:::..:||.||:||.:||||:........:|.:.:|.:
plant   403 LHNMRIGNHGALQLALELISYFSACSAFNMEMIYTIELFPTCVRNSAIAMARQALVLGGVFSPIM 467

  Fly   514 VDVLGALGWYIPTTICGCCVLVAGLLTLTLPETGTGKLSDKVE 556
            | ..|....:....:.|..:.:.||..:.||||....|.|.::
plant   468 V-AAGRKNAFWSFGLFGLAIGLLGLFAVGLPETRGSDLCDTMD 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 90/394 (23%)
OCT2NP_178054.1 MFS_OCT_plant 79..497 CDD:340936 101/469 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.970

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