DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and OCT3

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_173089.1 Gene:OCT3 / 838209 AraportID:AT1G16390 Length:518 Species:Arabidopsis thaliana


Alignment Length:592 Identity:130/592 - (21%)
Similarity:222/592 - (37%) Gaps:122/592 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EKNRELISE-----------ESMKDLLTKQLEVVGSGGAFVWAIFFLCVTPNILNGFHVSSYTLL 62
            :..|.|:|:           .|:::.:.:.:      |.|.||.|......:.. .|..:..|.:
plant     3 DSTRPLLSDFNSSESNLPPPRSLEETIERCI------GDFGWAQFLQAALVSFA-WFFDAQQTFI 60

  Fly    63 GHLPDDQ--WCGIPELQDTNWTHAQKREIVAKGLDSGGCTV----WDWNYGHLAKMSYEAALNYT 121
            ....|.|  |         :..::.:.:.|.....|..||:    |.|:            ||  
plant    61 TVFTDSQPMW---------HCDNSDRVDSVCNTSSSNLCTLPNQTWSWD------------LN-- 102

  Fly   122 GHLTQISPPAEVSCRVKGQHEFAHPETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILA 186
                                    |..:.:::|.|.|..|..:.....|..||...|..:...||
plant   103 ------------------------PHVSIISEWGLQCAGSFLKGFPASSFFLGCLIGGLALSTLA 143

  Fly   187 D-KFGRKSSFTLGAAFFIVGSFFCTFSP--WYSLFLAGRFALGAASSGLFYPAFTMIVENICLKH 248
            | ..|||:...|......:.|....||.  |...||  ||..|...:.:...|..:..|.:..|.
plant   144 DSSLGRKNMLLLSCLIMSLSSMLTAFSTSIWVYAFL--RFLNGCGRATIGTCALVLSTELVGKKW 206

  Fly   249 RSWMSIAFSASYPVGMIILAIVGYVIQ--PWRHLQLALTIPSLLLILNCYLMS---ESPRWLITN 308
            |..:.......:.:|.:.|.::||:.:  .||:|.:..:||:  ||..|.:.|   |||||||..
plant   207 RGQVGAMGFFCFTLGFLSLPMLGYINEGNSWRNLYVWTSIPT--LIYCCLVRSFVRESPRWLIVK 269

  Fly   309 QRYDRVYKILFRQPSHYQIQPAVAAPSQVASDKKSLEPEEGFSFGQ---KLKNGPLKSIIELYAN 370
            .|.:....||                ..:||:..::      ||..   :::|...||..::|..
plant   270 GRKEEAVSIL----------------QSIASNAITM------SFTNLCFEVENDQSKSNPDVYDA 312

  Fly   371 SKV--------RRMIFASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTGLVDIPSYLVPVIML 427
            .|:        ||::.|....|.: .:.||...|...||:.:.||.::...|.:.|::|:....:
plant   313 LKILVRKSWSFRRLLAAMVVGFGI-GMVYYGMPLALTNLNFNLYLGVVFNALSEFPAFLITFFFI 376

  Fly   428 RFTGRRLTTMFLFLWTGVS--LLLVLAVPAGSTTWIVAFAMLGRFGISATYSVVTLYTAELYPTQ 490
            ....||...:.....:|:|  |:.||....||..  :...::..|.....:::..:||.|::||.
plant   377 DKINRRDALIGFTALSGISSALIAVLGQQLGSLQ--IVLELVSFFSACTAFNMTLIYTIEMFPTC 439

  Fly   491 IRNSALGTCSTFAHVGSISAPYVVDVLGALGWYIPTTICGCCVLVAGLLTLTLPETGTGKLSDKV 555
            :||||:.........|.:.:|.:| ..|....:....:.|..:.:.||....||||....|.|.:
plant   440 VRNSAISMVRQALVFGGVFSPVMV-AAGRENQFWSYGLFGLIIGLCGLFVFGLPETRGSVLCDTM 503

  Fly   556 ESSASST 562
            :.....|
plant   504 DEEEYKT 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 96/397 (24%)
OCT3NP_173089.1 MFS_OCT_plant 87..492 CDD:340936 108/472 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.970

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