DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and PHT1;4

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_181428.1 Gene:PHT1;4 / 818479 AraportID:AT2G38940 Length:534 Species:Arabidopsis thaliana


Alignment Length:515 Identity:99/515 - (19%)
Similarity:170/515 - (33%) Gaps:184/515 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 FCGSFS----FGILADKFGRKSSFTLGAAFFIVGSF----------------FCTFSPWYSLFLA 220
            |||:.:    ||.|.||.|||..:.:.....::.|.                .|.|..|....:.
plant    78 FCGTLAGQLFFGWLGDKLGRKKVYGMTLMVMVLCSIASGLSFGHEPKAVMATLCFFRFWLGFGIG 142

  Fly   221 GRFALGAA---------SSGLFYPA--------------FTMIVENICLKHRSWMSIAFSASYPV 262
            |.:.|.|.         :.|.|..|              |.:|:           |.||.|.:|.
plant   143 GDYPLSATIMSEYANKKTRGAFVSAVFAMQGFGIMAGGIFAIII-----------SSAFEAKFPS 196

  Fly   263 GMIILAIVGYVIQP----WRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQPS 323
            .......:|..|..    ||.:.:|..||:.:...:...|.|:.|           |..|..:.:
plant   197 PAYADDALGSTIPQADLVWRIILMAGAIPAAMTYYSRSKMPETAR-----------YTALVAKDA 250

  Fly   324 HYQIQPAVAAPSQVASD-----KKSLEPEEGFSFGQKLKNGPLKSIIELYANSKVRRMIFASYFM 383
                       .|.|||     :..:|||:     |||:        |:.........:|:..||
plant   251 -----------KQAASDMSKVLQVEIEPEQ-----QKLE--------EISKEKSKAFGLFSKEFM 291

  Fly   384 -------------FCVTSLSYY------------------VTALNAAN--LSVSRYLYIIGTGLV 415
                         :.:..:::|                  ..::||..  ..::|...:|.. ..
plant   292 SRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQSMNAIQEVFKIARAQTLIAL-CS 355

  Fly   416 DIPSYLVPVIMLRFTGRRLTTMFLFLWTGVSLLLVLAVPAGSTT-------WIVAFAM---LGRF 470
            .:|.|...|..:...||....|..|.:..| .:..||:|....|       :::.:::   ...|
plant   356 TVPGYWFTVAFIDVIGRFAIQMMGFFFMTV-FMFALAIPYNHWTHKENRIGFVIMYSLTFFFANF 419

  Fly   471 GISATYSVVTLYTAELYPTQIRNSALGTCSTFAHVGSISAPYVVDVLGALGW------------- 522
            |.:||..||   .||::|.:.|::..|..:....:|:        ::||.|:             
plant   420 GPNATTFVV---PAEIFPARFRSTCHGISAASGKLGA--------MVGAFGFLYLAQNPDKDKTD 473

  Fly   523 --YIP-------TTICGCCVLVAGLLTLTLPETGTGKLSDKV-------ESSASSTPTEP 566
              |.|       ..:.|....:..|.|..:||: .||..:::       |:|.:.:.|.|
plant   474 AGYPPGIGVRNSLIVLGVVNFLGILFTFLVPES-KGKSLEEMSGENEDNENSNNDSRTVP 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 91/484 (19%)
PHT1;4NP_181428.1 2A0109 11..516 CDD:129965 95/497 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.