DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and PHT1;5

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_180842.1 Gene:PHT1;5 / 817844 AraportID:AT2G32830 Length:542 Species:Arabidopsis thaliana


Alignment Length:488 Identity:108/488 - (22%)
Similarity:182/488 - (37%) Gaps:133/488 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 FCGSFS----FGILADKFGRKSSFTLGAAFFIVGSF----------------FCTFSPWYSLFLA 220
            |||:.:    ||.|.||.|||..:.:.....::.|.                .|.|..|....:.
plant    78 FCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVLCSLGSGLSFGHSANGVMATLCFFRFWLGFGIG 142

  Fly   221 GRFALGAA---------SSGLFYPA-FTM---------IVENICLKHRSWMSIAFSA-SY---PV 262
            |.:.|.|.         :.|.|..| |.|         ||..|.   .|....||.| :|   ||
plant   143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIV---SSTFDHAFKAPTYEVDPV 204

  Fly   263 GMIILAIVGYVIQPWRHLQLALTIPSLLLILNCYLMSESPRWLI-----TNQRYDRVYKILFRQP 322
            |..: ....||   ||.:.:...||:||.......|.|:.|:..     |.|....:.|:|    
plant   205 GSTV-PQADYV---WRIVLMFGAIPALLTYYWRMKMPETARYTALVARNTKQAASDMSKVL---- 261

  Fly   323 SHYQIQPAVAAPSQVASDKKSLEPEEGFSFGQKLKNGPLKSIIELYANSKVRRMIFASYF---MF 384
                 |..:.|..:..|:..|..|  .|:||...:....:..:.|...:....::..:|:   :|
plant   262 -----QVDLIAEEEAQSNSNSSNP--NFTFGLFTREFARRHGLHLLGTTTTWFLLDIAYYSSNLF 319

  Fly   385 ---CVTSLSYYVTA--LNAAN--LSVSR---YLYIIGTGLVDIPSYLVPVIMLRFTGRRLTTMFL 439
               ..|::.:...|  :||.:  .:||:   .:.:.||    :|.|...|..:...||....:..
plant   320 QKDIYTAIGWIPAAETMNAIHEVFTVSKAQTLIALCGT----VPGYWFTVAFIDILGRFFIQLMG 380

  Fly   440 FLWTGVSLLLVLAVP-------AGSTTWIVAFAM---LGRFGISATYSVVTLYTAELYPTQIRNS 494
            |::..: .:..||:|       .....:::.:::   ...||.:||..||   .||::|.::|::
plant   381 FIFMTI-FMFALAIPYDHWRHRENRIGFLIMYSLTMFFANFGPNATTFVV---PAEIFPARLRST 441

  Fly   495 ALGTCSTFAHVGSISAPYVVDVLGALGW---------------YIP------TTICGCCVLVAGL 538
            ..|..:.....|:|        :||.|:               |.|      :.:...||...|:
plant   442 CHGISAASGKAGAI--------VGAFGFLYAAQSSDSEKTDAGYPPGIGVRNSLLMLACVNFLGI 498

  Fly   539 L-TLTLPETGTGKLSDKV-----ESSASSTPTE 565
            : ||.:||: .||..:::     |.|...|..|
plant   499 VFTLLVPES-KGKSLEEISREDEEQSGGDTVVE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 100/460 (22%)
PHT1;5NP_180842.1 2A0109 11..518 CDD:129965 104/474 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.