DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and Slc22a23

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001028339.1 Gene:Slc22a23 / 73102 MGIID:1920352 Length:689 Species:Mus musculus


Alignment Length:608 Identity:141/608 - (23%)
Similarity:235/608 - (38%) Gaps:118/608 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GSGGAFVWAIFFLCVTPNILNGFHVSSYTLLGHLPDDQWCGIPELQDTNWTHAQKREIVAKGLDS 96
            |.||.:...:..|...|.:..||...|.:.|...| |.||                ....||.:.
Mouse    90 GLGGGYQKTLVVLTWIPALFIGFSQFSDSFLLDQP-DFWC----------------RGAGKGTEL 137

  Fly    97 GGCTV---W----DWNYGHLAKMSYEAALNYTGHLTQI-------SPPAEVSCRVKGQ------- 140
            .|.||   |    :|........| .|:...|.:.:..       |||.      ||.       
Mouse   138 AGATVTGRWGDMGNWTSPSATPFS-TASWGTTSNRSNSSDTPPLPSPPG------KGNNDSNCDC 195

  Fly   141 HEFAHPETT-----FVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILADKFGRKSSFTLGAA 200
            |.:.:...|     .|:.|||.||.:.:...|:.|:.:|...|....|.:||..||:........
Mouse   196 HAWDYGIRTGLIQNVVSKWDLVCDNTWKVHIAKFSLLVGLIFGYLITGCIADWVGRRPVLLFSTI 260

  Fly   201 FFIVGSFFCTFSPWYSLFLAGRFALGAASSGLFYPAFTMIVENICLKHRSWMSIAFSASYPVGMI 265
            |.::.......|...::|...||..|...:|:....:.:.:| :|...:.:: |...||:     
Mouse   261 FILIFGLTVALSVNVTMFSTLRFFEGFCLAGIILTLYALRIE-LCPPGKRFI-ITMVASF----- 318

  Fly   266 ILAIVGYVIQP--------WRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQP 322
             :|:.|..:.|        |:.||..:..|.||::|...:..||.|||:..|:::...|::.   
Mouse   319 -VAMAGQFLMPGLAALCRDWQVLQALIICPFLLMLLYWSIFPESLRWLMATQQFESAKKLIL--- 379

  Fly   323 SHYQIQPAVAAPSQVASDKKSLEPEEGFSFGQKLKNGPLKSIIELYANSKVRRMIFASYFMFCVT 387
              |..|....:|.   ||.|.:.||    ..::|...|.|..|.....:   |.::.:..:.||.
Mouse   380 --YLTQKNCVSPE---SDIKGVMPE----LEKELSRRPKKVCIVKVVGT---RNLWKNIVVLCVN 432

  Fly   388 SLSYY------VTALNAANLSV----SRYLYIIGTGLVDIPSYLVPVIMLRFTGRR--------L 434
            ||:.|      ..::....:.|    :.|........:.:.|.|...::::|.|||        |
Mouse   433 SLTGYGIHHCFARSMMGHEVKVPLLENFYADYYTMASIALASCLAMCLVVKFLGRRGGLLLFMIL 497

  Fly   435 TTMFLFLWTGV-------------SLLLVLAVPAGSTT---WIVAFAMLGRFGISATYSVVTLYT 483
            |.:...|..|:             .|.|.|||....:.   :.:||:::|.|...|..|:...:.
Mouse   498 TALASLLQLGLLNLIGKYSQHPDSELQLKLAVGMSDSVKDKFSIAFSIVGMFASHAVGSLSVFFC 562

  Fly   484 AELYPTQIRNSALGTCSTFAHVGSISAPYVVDVLGALGWYIPTTICGCCVLVAGLLTLTLPETGT 548
            ||:.||.||...||.....|..|.::|| ::::....|:::...|..||.|:..:..|.|||:..
Mouse   563 AEITPTVIRCGGLGLVLASAGFGMLTAP-IIELHNQKGYFLHHIIFACCTLICIICILLLPESRN 626

  Fly   549 GKLSDKVESSASST--PTEPAEK 569
            ..|.:.:.:....|  |..|.:|
Mouse   627 QNLPENIANGEHYTRQPLLPHKK 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 97/418 (23%)
Slc22a23NP_001028339.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
2A0119 98..631 CDD:273328 134/580 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..188 6/31 (19%)
MFS 230..>359 CDD:119392 30/136 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843349
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

Return to query results.
Submit another query.