DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6356 and Sv2a

DIOPT Version :10

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_071313.1 Gene:Sv2a / 64051 MGIID:1927139 Length:742 Species:Mus musculus


Alignment Length:690 Identity:144/690 - (20%)
Similarity:224/690 - (32%) Gaps:233/690 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SSYTLLGHLPDD-----QWCGIPELQDTNWTHAQKREIVAKGLD----SGGCTVWDWNYG----- 107
            ||....||..||     ::.|||..:.     ..|.|.:|.|..    .||.:..:...|     
Mouse    80 SSDATEGHDEDDEIYEGEYQGIPRAES-----GGKGERMADGAPLAGVRGGLSDGEGPPGGRGEA 139

  Fly   108 -------HLAKMSYEAALNYTGH------------LTQISPPAEVSCRVKGQHEFAHPETTFVAD 153
                   .||: .||..|...||            |..::...||.  |.|   |..|.    |:
Mouse   140 QRRKDREELAQ-QYETILRECGHGRFQWTLYFVLGLALMADGVEVF--VVG---FVLPS----AE 194

  Fly   154 WDLTCDRSIQRTSAQVSISLGKFCGSFSFGILADKFGRKSSFTLGAAFFIVGSFFCTFSPWYSLF 218
            .|: |.....:....:.:.||...|:|.:|.|||:.||:....:..:...|.:||.:|...|..|
Mouse   195 KDM-CLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTF 258

  Fly   219 LAGRFALGAASSGLFYPAFTMIVENICL----KHRSWMSIAFSASYPVGMIILAIVGYVIQP--- 276
            |..|...|....|.....|:...|.:..    :|.||:.:    .:.:|.:..|.:.:.|.|   
Mouse   259 LFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCM----FWMIGGVYAAAMAWAIIPHYG 319

  Fly   277 -------------WRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKIL-------FRQ 321
                         ||...|....||:..|.......||||:.:.|.::|..:.:|       .|.
Mouse   320 WSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRA 384

  Fly   322 PSH-------------------YQIQP------------AVAAPSQVASDKKS-LEPE------- 347
            ..|                   .:||.            |::...||..:..| ..||       
Mouse   385 KGHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFSPEYRRITLM 449

  Fly   348 -------EGFSF---------------------------GQKLKNGPLKSIIE-------LYANS 371
                   ..||:                           |:::::......:|       .|.|.
Mouse   450 MMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFND 514

  Fly   372 K-----VRRMIFA-SYFMFC----VTSLSYY---VTALNAA--NLSVSRY--------------- 406
            |     ::.:.|. |.|..|    |||.:.:   .|.:|..  |..:..|               
Mouse   515 KFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHN 579

  Fly   407 -----LYIIGTG--------------LVDIPSYLVPVIMLRFTGRRLTTMFLFLWTGVSLL---- 448
                 |.:.|||              |..:|..:|..:::...||      |.:..|.|:|    
Mouse   580 KEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGR------LRMLAGSSVLSCVS 638

  Fly   449 -LVLAVPAGSTTWIVAFAMLGRFGIS-ATYSVVTLYTAELYPTQIRNSALG----TCSTFAHVG- 506
             ..|:.....:..|....:.|  |:| |:::.:.:.|.||||:..|.:|.|    .|...|.:| 
Mouse   639 CFFLSFGNSESAMIALLCLFG--GVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGI 701

  Fly   507 SISAPYVVDVLGALGWYIPTTICGCCVLVAGLLTLTLPET 546
            ||...:|.....|     |.......:.:...|.|.||||
Mouse   702 SIFTSFVGITKAA-----PILFASAALALGSSLALKLPET 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS_SLC22 140..544 CDD:340875 112/570 (20%)
Sv2aNP_071313.1 synapt_SV2 1..742 CDD:130366 144/690 (21%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145 16/69 (23%)
Blue background indicates that the domain is not in the aligned region.

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