DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and CG4462

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_650849.1 Gene:CG4462 / 42376 FlyBaseID:FBgn0038752 Length:573 Species:Drosophila melanogaster


Alignment Length:576 Identity:119/576 - (20%)
Similarity:207/576 - (35%) Gaps:150/576 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EVVGSGGAFVW-----AIFFLCVTPNILNGFHVSSYTLLGHLPDDQWCGIPELQ-------DTNW 81
            :|||..|  :|     .|.|||..|   ..:.::.....|          |||.       ||::
  Fly    45 DVVGDFG--IWQLRTILIIFLCKIP---AAWFMACIIFTG----------PELYPGSEFTCDTSY 94

  Fly    82 THAQKREIVAKGLDSGGCTVWDWNYGHLAKMSYEAALNYTGHLTQISPPAEVSCRVKGQHEFAHP 146
            ..:....  :..:....|.|.|.:.|                       ....|.   |..:...
  Fly    95 LTSSSNS--SFSISDNQCYVLDESTG-----------------------TSSECE---QFNYVSS 131

  Fly   147 ETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILADK----FGRKSSFTLGAAFFIVGSF 207
            ..:.:..::|.|.|.|.....|.....|...|    |::..|    ...:|::.:||...|:...
  Fly   132 FDSLIMQFNLVCLRDIFVAWTQYWHLFGVLVG----GVMGTKMMLGISPRSTYCVGAVAQILCGV 192

  Fly   208 FCTFSPWYSLFLAGRFALGAASSGLFYPAFTMIVENICL-KHRSWMSIAFSASYPVGMIILAIVG 271
            ...::..:||..|.| .|.|....:.:.|...|..:|.. .||....|.:...:.:|:|:|..:.
  Fly   193 VTGYARDFSLHCAFR-CLSAVCCAIMFTAGQAIFADITAGMHRIGAIILYDTFWSIGVILLPGLS 256

  Fly   272 YVIQPWRHLQLALTIPSLLLILNCYLMSESPRWLITN--QRY--DRVYKILFRQPS-----HYQI 327
            .....|..:.:.:|.|:::|||..|...:|||||:.:  .|:  |.|.:|| |:.:     .::|
  Fly   257 SFFNSWSLIYVGITFPTIMLILLLYWTPDSPRWLLRHAADRFSIDNVEQIL-REGAAINDRSFKI 320

  Fly   328 QPAVAAPSQVASDKKSLEPEEGFSFGQKLKNGPLKSIIELYANSKVRRMIFASYFMFCVTSLSYY 392
            .|......:..|::...:|             |.....||:...:.:..:.|::.     :|:::
  Fly   321 PPDFRQQLEQLSERLKAQP-------------PPAPWTELWKGKRAKTHMVAAHL-----ALAFF 367

  Fly   393 VTALNAANLSVSRYLYIIGTGLVDIPS----YLVP-VIMLRFTGRRLTTMFLFL----------W 442
            |  :|...:            |::|.|    |||| .|.:.|:  .:...||.|          |
  Fly   368 V--INFMGM------------LLNIRSFGRDYLVPNTIAMGFS--EIIGCFLALHFTLKHNKWKW 416

  Fly   443 TGVSLLLVLAVPAGSTTWI----------------VAFAMLGRFGISATYSVVTLYTAELYPTQI 491
            ....:..:||...|...||                :..|.:.:..:|...|::.....||.|...
  Fly   417 QCAGVFNILAGILGCMGWIFTNADSMDADLKVSLWMIIATIPKAAVSCAQSMILACMNELMPANK 481

  Fly   492 RNSALGTCSTFAHVGSISAPYV-----VDVLGALGWYIPTTICG--CCVLVAGLLT 540
            :...:.:..|:|.|..:|||:.     :|...:|..|...:|.|  |..|   |||
  Fly   482 KQLFVFSVVTWARVWLLSAPFFNVLRKIDTAMSLTSYCVFSILGGICTSL---LLT 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 93/426 (22%)
CG4462NP_650849.1 2A0119 <126..532 CDD:273328 94/448 (21%)
MFS 149..>284 CDD:119392 31/139 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458320
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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