DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and Slc22a20

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_941052.1 Gene:Slc22a20 / 381203 MGIID:2685809 Length:556 Species:Mus musculus


Alignment Length:612 Identity:156/612 - (25%)
Similarity:247/612 - (40%) Gaps:140/612 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TKQLEVVGSGGAFVWAIFFLCVTP-------NILNGF----------HVSSYT----------LL 62
            |..|:.:|..|.|......|.:.|       ..|..|          |.::||          |.
Mouse     4 TDLLDALGGVGRFQLVYTALLLLPCGLLACHTFLQNFTAAAPPHHCQHPANYTEPTTNVSGVWLR 68

  Fly    63 GHLPDDQWCGIPE----LQDTNWT----HAQKREIVAKGLDSGGCTVWDWNYGHLAKMSYEAALN 119
            ..:|.:|. |.||    ..:..|.    :|....:..:|...|      |.|..           
Mouse    69 AAIPLNQH-GDPEPCRRYVEPQWALLKPNASSHGVATEGCKDG------WVYDR----------- 115

  Fly   120 YTGHLTQISPPAEVSCRVKGQHEFAHPETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGI 184
                  .|.|                  :|.|.:|||.|:....|..||.....|...|:..||.
Mouse   116 ------SIFP------------------STIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGG 156

  Fly   185 LADKFGRKSSF--------TLGAAFFIVGSF--FCTFSPWYSLFLAGRFALGAASSGLFYPAFTM 239
            |||:.|||:..        ..|||...||||  :|.|          ||.:|...||:...:.::
Mouse   157 LADRLGRKAPLVWSYLQLAVSGAATAYVGSFSAYCVF----------RFLMGMTFSGIILNSLSL 211

  Fly   240 IVENICLKHRSWMSIAFSASYPVGMIILAIVGYVIQPWRHLQLALTIPSLLLILNCYLMSESPRW 304
            :||.:..:.|:...|....|:.:|.:|||.|.|:|:|||.||.|::.|.|:..|..:.:.||.||
Mouse   212 VVEWMPTRGRTVAGILLGFSFTLGQLILAGVAYLIRPWRWLQFAVSAPFLVFFLYSWWLPESSRW 276

  Fly   305 LITNQRYDRVYKILFRQPSHYQIQPAVAAPSQVA------SDKKSLEPEEGFSFGQ------KLK 357
            |:.                |.:.|.||....:||      ::.:.|..|...|:.|      :..
Mouse   277 LLL----------------HGKAQQAVQNLQKVAMMNGRKAEGERLTTEVVSSYIQDEFASVRTS 325

  Fly   358 NGPLKSIIELYANSKVRRMIFASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTGLVDIPSYLV 422
            |    ||::|:....:||:......::...|::||..|::.....:|.||.....|::|||:.||
Mouse   326 N----SILDLFRTPAIRRVTCCLMGVWFSNSVAYYGLAMDLQKFGLSIYLVQALFGIIDIPAMLV 386

  Fly   423 PVIMLRFTGRRLTTMFLFLWTGVSLLLVLAVPAGSTTWIVAFAMLGRFGISATYSVVTLYTAELY 487
            ....:.:.|||.|.....:..|:.::..:.:|....|.....|.||:..:::::..|.|:|.|||
Mouse   387 ATTTMIYVGRRATVSSFLILAGLMVIANMFMPEDLQTLRTVQAALGKGCLASSFICVYLFTGELY 451

  Fly   488 PTQIRNSALGTCSTFAHVGSISAPYVVDVLGALGWYIPTTICGCCVLVAGL-----LTLT----L 543
            ||:||...:|..|..|.:|.:.|| ::..||.:...:|....|...::||:     ||.|    |
Mouse   452 PTEIRQMGMGFASVNARLGGLVAP-LITTLGEISPVLPPVSFGATSVLAGMAVACFLTETRNVPL 515

  Fly   544 PETGTGKLSDKVESSASSTPTEPAEKQ 570
            .|| ...:..:|:...|...||...::
Mouse   516 VET-IAAMERRVKQGRSKRDTEQKSEE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 116/407 (29%)
Slc22a20NP_941052.1 2A0119 11..518 CDD:273328 148/579 (26%)
MFS 138..507 CDD:119392 113/399 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..556 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843539
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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