DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6356 and CarT

DIOPT Version :10

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:575 Identity:143/575 - (24%)
Similarity:251/575 - (43%) Gaps:61/575 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PEKNRELISEESMKDLLTKQLEVVGSGGAF-VWAIFFLCVTPNILNGFHVSSYTLLGHLPDDQWC 71
            ||....:.....:.||    |..:|..|.: ...:|.:|:...|..||...:...:...|||.||
  Fly    24 PESQPSVDEAFDLDDL----LPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWC 84

  Fly    72 GIPELQDTNWTHAQKREIVAKGLDS-----GGCTVWDWNYGHLAKMSYEAALNYTGHLTQISPPA 131
            .||||.|.. ...:|...:.|.||:     ..|..:..|:..|.:...|      ..||.:.|.|
  Fly    85 RIPELLDLP-LEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEE------DDLTTMEPNA 142

  Fly   132 E---VSCRVKGQHEFAHPETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILADKFGRKS 193
            .   :.|....::..:...::.|.|:||.||:.|..|....:::.|...|.:.||:|.|:.||:.
  Fly   143 SWPLIKCPQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRL 207

  Fly   194 SFTLGAAFFIVGSFFCTFSPWYSLFLAGRFALGAASSGLFYPAFTMIVENICLKHRSWMSIAFSA 258
            |:.:..|..:.||...:.|..:..:...|..:|.....::...|.:.:|.:...:||::::....
  Fly   208 SYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCT 272

  Fly   259 SYPVGMIILAIVGYVIQPWRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKIL----- 318
            .|..|:::|:.|.|:.:.|..|....::|.....|..::|.||||||:...|.:...|||     
  Fly   273 FYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAK 337

  Fly   319 -----FRQPSHYQIQPAVAAPSQVASDKKSLEPEEGFSFGQ----KLKNGPLKSI---IELYANS 371
                 |.:..|.:::      :|:..||...:.::..:.|.    :..|..||:|   :..:||.
  Fly   338 VNGREFPEAVHLKLE------AQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANE 396

  Fly   372 KVRRMIFASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTGLVDIPSYLVPVIMLRFTGRRLTT 436
            .|            ...||||..|| ..|..||.:|    :.:|::||||.....:...|||...
  Fly   397 TV------------YLGLSYYGPAL-GTNQYVSFFL----SAVVELPSYLCCWYFMDTWGRRWPL 444

  Fly   437 MFLFLWTGVSLLLVLAVPAGSTTWIVAFAMLGRFGISATYSVVTLYTAELYPTQIRNSALGTCST 501
            ....:..||:.::.:.:|..:....:...::.:..:||::.::..:..||||||:|...:|..|.
  Fly   445 SLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSY 509

  Fly   502 FAHVGSISAPYVVDVLGALGWYIPTTICGCCVLVAGLLTLTLPETGTGKLSDKVE 556
            ...:|.|..|::. .||.....:|..|.|...::.|:..|.||||...:|...:|
  Fly   510 IGGLGLIGIPFIT-YLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIE 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS_SLC22 140..544 CDD:340875 102/420 (24%)
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 102/422 (24%)
xylE <306..>342 CDD:182225 12/35 (34%)

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