DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6356 and Svopl

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_011239688.1 Gene:Svopl / 320590 MGIID:2444335 Length:544 Species:Mus musculus


Alignment Length:471 Identity:112/471 - (23%)
Similarity:189/471 - (40%) Gaps:113/471 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 DWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILADKFGRKS----SFTLGAAFFIVGSFFCTFSP 213
            :|.|   .:.|.......:..|....|..||:|||::||..    ||..||.|    |...:|||
Mouse    78 EWQL---ENWQVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYF----SLLTSFSP 135

  Fly   214 WYSLFLAGRFALGAASSGLFYPAFTMIV--ENICLKHRSWMSIAFSASYPVGMIILAIVGYVIQP 276
            .|..|:..|..:|...||   .|..:|:  |.:..|:|.:|.......:..|.:::..:..|:.|
Mouse   136 SYIWFVFLRTMVGCGVSG---HAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIP 197

  Fly   277 ---WRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQPSHYQIQPAVAAPSQVA 338
               ||.|....:||.::||:....:.||.|:.:                |....|.|:.....:|
Mouse   198 TIGWRWLIRIASIPGIILIMAFKFIPESARFNV----------------STGNTQAALNTLESIA 246

  Fly   339 SDKKSLEPEEGFSFGQKL-----KNGPLKSIIELYANSKVRRMIFASYFMFCVTSLSYYVTALNA 398
            ...:|:.||     ||.:     |.|....:::    ||..|.....:.::...|.:||...|.:
Mouse   247 KMNRSVMPE-----GQLVEPILEKRGRFADLLD----SKYLRTTLQIWIIWLGISFAYYGVILAS 302

  Fly   399 ANL------------------------------------SVSRYLYIIGTGLVDIPSYLVPVIML 427
            |.|                                    :.|.|..:|.:.|.:|....:.::.:
Mouse   303 AELLERDLVCGSKSESEPEVVETTGDSGEGLSPCYCHIFAPSDYRTMIISTLGEIALNPLNILGI 367

  Fly   428 RFTGRRLT-------TMFLFLWTGVSLLLVLAVPAGSTTWIVAFAMLGRFGISATYSVVTLYTAE 485
            .|.||||:       |...||     ||.:....||    ::.|..:.|..::|.::.:.:||||
Mouse   368 NFLGRRLSLSITMGCTALFFL-----LLNICTSSAG----LIGFLFMLRALVAANFNTIYIYTAE 423

  Fly   486 LYPTQIRNSALGTCSTFAHVGSISAPYVVDV------LGALGWYIPTTICGCCVLVAGLLTLTLP 544
            :|||.:|...:||..:...:|::.||::..|      ||||..:  :::|..|.:.|    .|||
Mouse   424 VYPTPMRAIGMGTSGSLCRIGAMVAPFISQVLMSASFLGALCLF--SSVCVVCAISA----FTLP 482

  Fly   545 ETGTGKLSDKVESSAS 560
            ....|:.....:|.::
Mouse   483 IETKGRALQVSDSGSA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 105/439 (24%)
SvoplXP_011239688.1 MFS_SVOPL 49..482 CDD:341000 108/453 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843810
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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