DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and F45E10.2

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001022174.1 Gene:F45E10.2 / 185801 WormBaseID:WBGene00009729 Length:538 Species:Caenorhabditis elegans


Alignment Length:595 Identity:142/595 - (23%)
Similarity:246/595 - (41%) Gaps:147/595 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NPEKNRELISEESMKDLLTKQ--------------------LEVVGSGGAFVWAIFFLCVTPNIL 51
            ||      :.|:.:||:.|||                    .|.:||.|.|....|.|...|...
 Worm    37 NP------LIEQGLKDIGTKQEAHYVEEVDVRNDKIKLESIFEGLGSFGRFQQIQFILICIPIAF 95

  Fly    52 NGFHVSSYTLLGHLPDDQWCGIPELQDTNWTHAQKREIVAKGLDSGGCTVWDWNYGHLAKMSYEA 116
            ...||.|:|.:.. |..:.|     .:||.|                                  
 Worm    96 VSMHVMSWTFVVS-PARKIC-----NETNET---------------------------------- 120

  Fly   117 ALNYTGHLTQISPPAEVSCRVKGQHEFAHPETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFS 181
                               |:.|..|.|:..:.   .|::..|....|.:.|....:|:..|||:
 Worm   121 -------------------RIDGCEELAYSASD---RWEMDGDNGWIRATVQAVYFIGQMIGSFT 163

  Fly   182 FGILADKFGRKSSFTLGAAFFIVGSFFCTFSP--W-YSLFLAGRFALGAASSGLFYPAFTMIVEN 243
            .|::|||.|||..........:|.:.....:|  | |::..||   .|....|::..|..:.:|.
 Worm   164 CGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAG---TGFTQPGIYGVAVVLGIEL 225

  Fly   244 ICLKHRSWMSIAFSASYPVGMIILAIVGYVIQPWRHLQLALTIPSLLLILNCYLMSESPRWLITN 308
            :..|:||::::..:....:|.::||::.|.|..:|.|..::.||||:.|...:::.||.|||::.
 Worm   226 VGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVDYRLLHASIAIPSLIFITYYWMIHESARWLVSQ 290

  Fly   309 QRYDRVYKILFRQ--------PSHYQIQPAVAAPSQVASDKKSLEPEEGFSFGQKLKNGPLKSII 365
            ::||....:|...        |.::  ...:.....|.:.||.      .|||          :.
 Worm   291 EKYDDANVVLCATANWNKKTIPKNW--AEKIEKKMDVTATKKK------DSFG----------VF 337

  Fly   366 ELYANSKVRRMIFASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTGLVDIPSYLVPVIMLRFT 430
            :|....::|:...|::.|:.||::.||...:.:.....|.::..:.:.|:::|:.::..:::...
 Worm   338 DLIRTPQMRKRTIANFVMWPVTTMMYYGLTMRSDVGGGSLFVTFVTSQLMELPAVIIVALLIDRL 402

  Fly   431 GRRLTTMFLFLWTGVSLLLVLAVPAGSTTWI----------VAFAMLGRFGISATYSVVTLYTAE 485
            |||:.........|:.||         .:|:          |...|:.:..:|..|:|:..||:|
 Worm   403 GRRIMYSGAIFTAGMLLL---------ASWLTHDLIPSQYAVIMLMVAKGAVSVAYTVMYTYTSE 458

  Fly   486 LYPTQIRNSALGTCSTFAHVGSISAPYV----VDVLGALGWYIPTTICGCCVLVAGLLTLT-LPE 545
            |:||.|||:|:|.|||.|..|:|||.::    ||..|.:...||.||...|   |.:::.| |||
 Worm   459 LFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILALC---ASIVSWTMLPE 520

  Fly   546 TGTGKLSDKV 555
            |...:|.|.:
 Worm   521 TVNQQLPDSI 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 104/402 (26%)
F45E10.2NP_001022174.1 MFS_SLC22 121..518 CDD:340875 111/432 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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