DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6356 and oct-2

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_509899.3 Gene:oct-2 / 181325 WormBaseID:WBGene00003843 Length:757 Species:Caenorhabditis elegans


Alignment Length:631 Identity:165/631 - (26%)
Similarity:288/631 - (45%) Gaps:102/631 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QSTENPEKNRELISE--------------ESMKDLLTKQLEVVG-------SGGAFVWAIF-FLC 45
            :::..|.|.| |.||              .|.|:...|:|..:.       .||...|.|. :|.
 Worm   113 ENSRKPSKAR-LQSEMEIRNQHYQKQKQYASTKETRAKRLTDIDFEGILQLIGGCSYWQIIVYLI 176

  Fly    46 VT----PNILNGFHVSSYTLLGHLPDDQWCGIP---------ELQDTNWT--------------- 82
            ::    |:.:  |::|...:: :.| |.||.||         ||..||:|               
 Worm   177 ISVQQVPHAM--FNLSVVYMM-YQP-DHWCKIPFFNEESFSAELGYTNYTWDQVLNSTIAFPRTF 237

  Fly    83 HAQKREIVAKGLDSGGCTVWDWNYGHLAKMSYEAA---LNYTGHLTQISPPAEVSCRVKGQHEFA 144
            :.|:.|     |....|..::.:|.|: |:|..|.   :|.||.:.:        |: :.:::.:
 Worm   238 NKQRNE-----LHHDQCHYFERDYVHI-KLSPWAQVKDMNATGKINR--------CK-EWEYDTS 287

  Fly   145 HPETTFVADWDLTCDRSIQRTSAQVSISLGKFCGSFSFGILADKFGRKSSFTLGAAFFIVGSFFC 209
            ..:.|.|.:|:..||.:..|....:|.|||...|.|..|.::|::|||::.|......::..|..
 Worm   288 VMDRTIVTEWNRVCDNNWSRAHVHMSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLL 352

  Fly   210 TFSPWYSLFLAGRFALGAASSGLFYPAFTMIVENICLKHRSWMSIAFSASYPVGMIILAIVGYVI 274
            |:|..:.:||..||.|.|.:......|:.:.:|....|:||.:.....|.:..|...||::.|:.
 Worm   353 TYSKEFEIFLVVRFLLAATNEAADLAAYVLCMEVTGTKYRSIVGSLIQAPWACGYAFLALIAYLT 417

  Fly   275 QPWRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQPSHYQIQPAVAAPSQVAS 339
            :.|..:.|...:..::.::..|.:.|||||||.|.:..:..||: |:..||.       .|::.|
 Worm   418 KSWTMIHLICVLLHIISLMLLYFLPESPRWLILNNKTKQAEKII-REACHYN-------KSRLPS 474

  Fly   340 DKKSLEPEEGFSFGQKLKNGPLKSIIELYANSKVRRMIFASYFMFCVTSLSYY--VTALNAANLS 402
            |...:...|...:   :|:....|...|:.:|::|......:.::..|:|.||  |.||:..:..
 Worm   475 DLGLVRHAEKKKW---MKHNEKPSYFHLFRSSELRFRNVVLFIVWIATALVYYGMVIALSDQSSP 536

  Fly   403 VSR------YLYIIGTGLVDIPSYLVPVIMLRFTGRRLTTMFLFLWTGVSLLL-VLAVPAGSTTW 460
            ..|      :|.....|.:::|:.:..|.:||. ||:.:.|.:...:|:.||. |:.|....:|.
 Worm   537 GRRVFDGNFFLNNAMAGAIELPTLVFCVFLLRM-GRKRSQMLVLFGSGLFLLTSVVMVYRKQSTL 600

  Fly   461 IVAFAMLGRFGISATYSVVTLYTAELYPTQIRNSALGTCSTFAHVGSISAPYVV---DVLGALGW 522
            .:.|.:|.:..|..:::::.::|:||.||.:||||:|..|..|.:|:.::.|:.   ||...|  
 Worm   601 ALIFMLLSKACIQGSFNILYIFTSELNPTVVRNSAVGISSMVARMGAGASGYIAILSDVTMPL-- 663

  Fly   523 YIPTTICGCCVLVAGLLTLTLPETGTGKLSDKVESSASSTP--TEP 566
             :|.||..|..|:||.|.|.||||....|.|.:..|.....  |:|
 Worm   664 -VPMTIFACFSLLAGCLVLLLPETQGLPLPDTILDSVQMVKRNTKP 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 108/388 (28%)
oct-2NP_509899.3 MFS_SLC22 281..673 CDD:340875 109/406 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163091
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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