DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6356 and oct-1

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:604 Identity:154/604 - (25%)
Similarity:261/604 - (43%) Gaps:95/604 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ELISEESMKDLL--TKQ------LEVVGSGGAFVWAIFF-LCV---TPNILNGFHVSSYTLLGHL 65
            |..:|.|.:.|:  ||.      ||.||:.|.:....|| :|:   .|:..:.|::.  .::|:.
 Worm     7 ETFAEISQEILMSATKPPDFDFVLEQVGNYGTYQIVFFFIICLPTSLPSAFSAFNIP--FVVGNP 69

  Fly    66 PDDQWCGIPELQD-----TNWTHAQKREIVAKGLDSGGCTVWDWNYGHLAKMSYEAALNYTGHLT 125
            |  ..|.|||.::     ||.|     :|::                  .|...|..:|.....|
 Worm    70 P--HTCHIPEGKEYLRPLTNDT-----QILS------------------CKQYNETQINVFRAFT 109

  Fly   126 QISPPAE--------VSCRVKGQHEFAHPETTF----VADWDLTCDRSIQRTSAQVSISLGKFCG 178
              |.|.:        |.|    |:.:.:..:|:    |.:::|.||:......:..|..:|.|.|
 Worm   110 --SAPVDTYSDRISLVPC----QNGWDYDNSTYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIG 168

  Fly   179 SFSFGILADKFGRKSSFTLGAAFFIVGSFFCTFSPWYSLFLAGRFALGAASSGLFYPAFTMIVEN 243
            :..||.:||||||:.||.:.....||.....:|:.....|:..||..|.|...||...|.:.:|.
 Worm   169 NCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 233

  Fly   244 ICLKHRSWMSIAFSASYPVGMIILAIVGYVIQPWRHLQLALTIPSLLLILNCYLMSESPRWLITN 308
            :....|.:..:..|..:...|.:|.:|...|:.||.|......|....|:..:.:.|||||.::.
 Worm   234 MGNSGRIFSGLMTSLFFGAAMALLGVVAMFIRRWRQLTFFCNAPFAFYIIYYFFLPESPRWSVSV 298

  Fly   309 QRYDRVYKIL-----FRQPSHYQIQPAVAAPS--QVASDKKSLEPEEGFSFGQKLKNGPLKSIIE 366
            .::....|.|     ....|:..:...|.:..  |.|:::|..:...              ::.:
 Worm   299 GKWADAKKQLKKIAKMNGKSNVDVDELVDSMKNHQNAAEEKETKRSH--------------NVTD 349

  Fly   367 LYANSKVRRMIFASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTGLVDIPSYLVPVIMLRFTG 431
            |:....:||......:::.:.::.|....||.:||.|..|...|..|.|::|.|.|...:|:..|
 Worm   350 LFKTPNLRRKTLIVTYIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFVVWPLLQCAG 414

  Fly   432 RRLTTMFLFLWTGVSLLLVLAVPAGSTTWIVAFA-MLGRFGISATYSVVTLYTAELYPTQIRNSA 495
            ||.|.....:..|:..:..:.:|.| ..|:||.| .:|:||:.:.::|:.::..|||||.:|...
 Worm   415 RRWTLAATMIVCGIGCVSAMFMPDG-YPWLVASASFIGKFGVGSGFAVIYIFAGELYPTVVRAIG 478

  Fly   496 LGTCSTFAHVGSISAPYVVDVLGALGWYIPTTICGCCVLVAGLLTLTLPETGTGKLSDKVESSA- 559
            :|..|..|..|.:.||::|: ||.:...:|..|.|...|.||:||..||||....|...:|.:. 
 Worm   479 MGMSSMVAGSGLLLAPHIVN-LGKIVKILPLLIMGLMALSAGILTFFLPETLGAPLPMTIEDAEN 542

  Fly   560 --------SSTPTEPAEKQ 570
                    |...|:.|:|:
 Worm   543 FGKKPEPDSGMFTQAAKKR 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 104/384 (27%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 140/550 (25%)
MFS 134..526 CDD:119392 109/407 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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