DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6356 and sv2b

DIOPT Version :9

Sequence 1:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:687 Identity:147/687 - (21%)
Similarity:221/687 - (32%) Gaps:253/687 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GHLPDD-----QWCGIPELQDTNWTHAQK--------REIVAKGLDSGGCTVWDWNYGHLAKMSY 114
            ||..||     ::.|||...|.....|..        .:|:|:.::         :...|| ..|
 Frog    69 GHDEDDEIYEGEYQGIPHPDDLRQHKASSIRDEFKDPADIIAERIE---------DEEQLA-YQY 123

  Fly   115 EAALNYTGH------------LTQISPPAEVSCRVKGQHEFAHPETTFVADWDLTCDRSIQRTSA 167
            |..:...||            |..::...||.  |.|   |..|.    |:.|:...|| .:...
 Frog   124 ENIIQECGHGRFQWTLFVVLGLALMADGVEVF--VVG---FVLPS----AEKDMCLSRS-NKGML 178

  Fly   168 QVSISLGKFCGSFSFGILADKFGRKS----SFTLGAAFFIVGSFFCTFSPWYSLFLAGRFALGAA 228
            .:.:.||...|:|.:|.||||.|||.    |.|:.|||    ||..:|...|.|||..|...|..
 Frog   179 GLIVYLGMMLGAFVWGGLADKVGRKKCLIISLTINAAF----SFVSSFVQGYGLFLFCRLISGFG 239

  Fly   229 SSGLFYPAFTMIVENICL----KHRSWMSIAFSASYPVGMIILAIVGYVIQP------------- 276
            ..|.....|....|.:..    :|.||:.:    .:.:|.:..|.:.:.|.|             
 Frog   240 IGGSLPIVFAYFSEFLAREKRGEHLSWLCM----FWMIGAVYAAAMAWSIIPHYGWGFSMGTHYH 300

  Fly   277 ---WRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQPSHYQIQPAVAAPSQ-- 336
               ||...:...:|.:..|:....|.||||:|:...::|..:.||  :..|.....|...|.:  
 Frog   301 FHSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMIL--KNIHDTNMRAKGEPEKVF 363

  Fly   337 -VASDKKSLEPEE--------GFSF-----------------------GQKLKNGPLKSII---- 365
             |:..|...:|:|        |..|                       ||..||....:::    
 Frog   364 TVSHIKTPKQPDEFIEIQSSTGTWFQRWFVRIMTVIKQIWENMLHCFSGQFRKNTIFLAVVWFTM 428

  Fly   366 --------------------ELYANSKVRRM---------------------------------- 376
                                |.|| |||:|.                                  
 Frog   429 SLSYYGLTVWFPDTIRYLQDEDYA-SKVKRFTDENVKNFNFNFTLENQIHEDGEYYNDRFYKMKL 492

  Fly   377 --------IFASYFMFCVTSLS------------YYVTAL--------NAANLSVSR-------- 405
                    :|...:...|||..            :|.|.|        |..|::.|:        
 Frog   493 KYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFIDCNFINVTFSQPKEGCHID 557

  Fly   406 ---------YLYIIGTGLVDIPSYLVPVIMLRFTGR-----------RLTTMFLFLWTGVSLLLV 450
                     ||......|..:|..::..:::...||           .:...|||.....|.:: 
 Frog   558 FEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLISAVCCFFLFFGNSESAMI- 621

  Fly   451 LAVPAGSTTWIVAFAMLGRFGIS-ATYSVVTLYTAELYPTQIRNSAL----GTCSTFAHVG-SIS 509
                    .|...|.     |.| |.::.:.:.|.|||||..|.:|.    |.|...|..| ||.
 Frog   622 --------GWQCLFC-----GTSIAAWNALDVVTVELYPTNKRATAFGILNGLCKLAAIFGNSIF 673

  Fly   510 APYVVDVLGALGWYIPTTICGCCVLVAGLLTLTLPET 546
            |.:|     .:...||..:....::..||::|.||||
 Frog   674 ASFV-----GITKVIPILLASTALVGGGLISLRLPET 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6356NP_651240.1 MFS 167..544 CDD:119392 115/554 (21%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 147/687 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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