DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and FMS1

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_013733.1 Gene:FMS1 / 855034 SGDID:S000004622 Length:508 Species:Saccharomyces cerevisiae


Alignment Length:532 Identity:103/532 - (19%)
Similarity:182/532 - (34%) Gaps:168/532 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLIVGGGLSGL--ASALKILAMESTLKVRMIEASDALGG----LMGQNSTRLVDAAQQDMLALLT 72
            |:|:|.|::||  ||.|....::..|   ::||.|.:||    :.|....:....|......|..
Yeast    11 VIIIGAGIAGLKAASTLHQNGIQDCL---VLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTN 72

  Fly    73 LIHLSPRRRRSISGSLRRCWDLDRGLTAMPAKFELGR-------YIDMLDLRMPKFRSKRFNLRE 130
            .:.|...:.....|..|..:|.|..:.   ...|.||       .::::|..|.||....|:...
Yeast    73 PLFLEEAQLSLNDGRTRFVFDDDNFIY---IDEERGRVDHDKELLLEIVDNEMSKFAELEFHQHL 134

  Fly   131 RVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVFMSVC---SSCGGL--KVLI--DF 188
            .||:..       ||.....::|...|.:..   :::.|  ...:|   ....||  |:|.  |.
Yeast   135 GVSDCS-------FFQLVMKYLLQRRQFLTN---DQIRY--LPQLCRYLELWHGLDWKLLSAKDT 187

  Fly   189 YFTYP-TSFYEISTQMLIENILEQL--QFIKIILNCRAVRLEHFKNYVQVTDDQGNKHTAQAAIL 250
            ||.:. .:.:.::...:::.|.:..  .::|:....:::..|..|| |.|..:.|..:.|...|:
Yeast   188 YFGHQGRNAFALNYDSVVQRIAQSFPQNWLKLSCEVKSITREPSKN-VTVNCEDGTVYNADYVII 251

  Fly   251 AIPWN----KVQ-------KLHFEPRIPKVFLPRTTS-RSGRKGRQVISQFQLRYGKSVWTDLGY 303
            .:|.:    .||       ::.|:|.:..|....... ..|..|: ||.:|:             
Yeast   252 TVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGK-VIFEFE------------- 302

  Fly   304 SGNFLSSQPMVSGHECRMSSFCGYVLHLPEDQDEVLQ--------DVVDLLAEHFGEEMRQPLEC 360
                          ||..|:....::.|....:|.::        |.:|.:.|.  |:.::....
Yeast   303 --------------ECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLER--EDSQKHTSV 351

  Fly   361 QCFTDELNVAQHKPQTKPWHRVIWSSSSAVGTSYRSLMGGAVQ--------------SGFRAAVN 411
            .|:            ::|...|..|.|:.| .|:..||...:.              |.|:..:|
Yeast   352 TCW------------SQPLFFVNLSKSTGV-ASFMMLMQAPLTNHIESIREDKERLFSFFQPVLN 403

  Fly   412 AVF------------------------VVRPQVVS-WK-------------------DMLVEQPK 432
            .:.                        |:|..:|| |.                   ||:|.. .
Yeast   404 KIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAM-S 467

  Fly   433 NGQDVVSAGRIR 444
            ||||    .|||
Yeast   468 NGQD----SRIR 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 87/451 (19%)
FMS1NP_013733.1 Amino_oxidase 18..503 CDD:396255 99/525 (19%)

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