DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and PAO4

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_176759.1 Gene:PAO4 / 842894 AraportID:AT1G65840 Length:497 Species:Arabidopsis thaliana


Alignment Length:551 Identity:109/551 - (19%)
Similarity:198/551 - (35%) Gaps:166/551 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLPFGT--------QTPELDVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTR 58
            :||.||        ...:..|:::|.|:||||:|..:  .|::.||.::|:.|.:||.:   .|.
plant    11 NLPEGTISELMQKQNNVQPSVIVIGSGISGLAAARNL--SEASFKVTVLESRDRIGGRI---HTD 70

  Fly    59 LVDAAQQDMLALLTLIH-------LSPRRRR------SISGSLRRCWDLDRGLTAMPAKFELGRY 110
            .......||.|  :.:|       |:|..||      ..||.....:|.|         .|....
plant    71 YSFGCPVDMGA--SWLHGVSDENPLAPIIRRLGLTLYRTSGDDSILYDHD---------LESYGL 124

  Fly   111 IDMLDLRMP------------KFRSKRFNLRERVSN---------------------------ME 136
            .||...::|            :...:...:|:..:|                           ::
plant   125 FDMHGNKIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISIVLDRNPELRQEGMAYEVLQ 189

  Fly   137 QHICH-HLFFSKSRNFMLNLVQLVCGVPANEVDYDVFMSVCSSCGGLKVLIDFYFTYPTSFYEIS 200
            .::|. ..:|:..    .||:.|.|.      |.|..:|     ||..:::..|           
plant   190 WYLCRMEAWFAVD----ANLISLKCW------DQDECLS-----GGHGLMVQGY----------- 228

  Fly   201 TQMLIENILEQLQFIKIILNCRAVR-LEHFKNYVQVTDDQGNKHTAQAAILAIPWN--KVQKLHF 262
             :.:|..|.:.|.   |.||.|..: :....|.|.|..:.|....|.|.|:.:|..  |...:.|
plant   229 -EPVIRTIAKDLD---IRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQF 289

  Fly   263 EPRIPKVFLPRTTSRSG-RKGRQVISQFQLRYGKSVWTDLGYSGNFLSSQPMVSGHECRMSSFCG 326
            ||.:|:.   :|::.|| ..|.:  ::..||:.::.|.::.:.|       ||:    ..|..||
plant   290 EPELPQW---KTSAISGLGVGNE--NKIALRFDRAFWPNVEFLG-------MVA----PTSYACG 338

  Fly   327 YVLHLPE----------DQDEVLQDVVDLLAEHFGEEMRQPLECQCFTDELNVAQH-------KP 374
            |.|:|.:          ....:.||:..|..|.....:...|: :.|.|..:.||:       .|
plant   339 YFLNLHKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLK-KMFPDAPDPAQYLVTRWGTDP 402

  Fly   375 QT--------------------KPWHRVIWSSSSAVGTSYRSLMGGAVQSGFRAAVNAVFVVRPQ 419
            .|                    :|...:.: ...||...::....||..:|..|:.|....:..:
plant   403 NTLGCYAYDVVGMPEDLYPRLGEPVDNIFF-GGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFER 466

  Fly   420 VVSWKDMLVEQPKNGQDVVSAGRIRGLLSRL 450
            :.:|:.:.:.......|::....:...:||:
plant   467 LGAWEKLKLVSLMGNSDILETATVPLQISRM 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 99/493 (20%)
PAO4NP_176759.1 PLN02268 29..464 CDD:177909 101/498 (20%)

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