Protein Alignment shps and LDL3

DIOPT Version :10

• Sequence 1: NP_651239.1
• Gene: shps / 42892
• FlyBaseID: FBgn0286199
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_193364.5
• Gene: LDL3 / 827325
• AraportID: AT4G16310
• Length: 1628
• Species: Arabidopsis thaliana
• Alignment Length: 620
• Identity: 111/620 - (17%)
• Similarity: 203/620 - (32%)
• Gaps: 218/620 - (35%)

  Fly    11 ELDVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTRL---VDAAQQDMLALLT 72
            |..|:::|.|.:||.:|..:  ......|.::||...:||.:..:.:.|   ||..    .:::|
plant   617 EKKVIVIGAGPAGLTAARHL--QRQGFSVTVLEARSRVGGRVFTDRSSLSVPVDLG----ASIIT 675

  Fly    73 LIHLSPRRRRSISGSLRRCWDLDRGLTAM---------------PAKF------ELGRYIDMLDL 116
            .|.......|....|:..|..|...|:.:               ||:.      |....||.:||
plant   676 GIEADVPSERMPDPSVLVCNQLGLELSVLHGFCPLYDTVTGKKVPAELDDALQAEFNSLIDDVDL 740

  Fly   117 RMPKFRSKRFNLRERVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVFMSVCSS--- 178
            .:.:...:|.|.......:|              :.|..:::    |.::|:.|.|..:.||
plant   741 LVEEIGKERANKMSLEDGLE--------------YGLQRLRM----PHDKVNIDKFGLLNSSSKT 787

  Fly   179 -----------------------------------CGGLKVLI--------DFY--FTYPTSFYE 198
                                               |..:...:        :||  |..|.:..:
plant   788 GIRGPFMQDESWKDDFLNPLERRVMNWHFAHTEYGCAAVLKEVSLPHWNQDEFYGGFGGPHAMIK 852

  Fly   199 ISTQMLIENILE--QLQFIKIILNCRAV----RLEHFKNYVQVTDDQGNKHTAQAAILAIPWN-- 255
            .....::|::.|  .:...||:.:...|    .:::.|:.|:|:...|.::...|.::.:|..
plant   853 GGYSRVVESLAEGLDIHLNKIVSDVSYVSDVSAMDNSKHKVRVSTSNGCEYLGDAVLVTVPLGCL 917

  Fly   256 KVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQFQLRYGKSVWTD-LGYSGNFLSSQPMVSGHEC 319
            |.:.:.|.|.:|    ....:...:.|..|:::..|.:....|.| :.|.| ..:.:..:.| ||
plant   918 KAETIKFSPPLP----DWKYASIKQLGFGVLNKVVLEFPTVFWDDSVDYFG-ATAEETDLRG-EC 976

  Fly   320 RM---------------------------SSFCGYVLH-------------LPEDQDEVLQDVVD 344
            .|                           .|...:|.|             :|   |.|...|.|
plant   977 FMFWNVKKTVGAPVLIALVVGKAAFEYTNKSKSEHVNHAMMVLRKLFGGDLVP---DPVASVVTD 1038

  Fly   345 LLAEHF-------------GEE---MRQPLE-CQCFTDELNVAQHKPQTKPWHRVIWSSSSAVGT 392
            ...:.:             ||:   :.:|:: |..|..|....:| |.|
plant  1039 WGTDPYSYGAYSYVAIGASGEDYDVLGRPVQNCLFFAGEATCKEH-PDT---------------- 1086

  Fly   393 SYRSLMGGAVQSGFRAAVNAVFVVRPQVVSWKDMLVE----QPKNGQDVVSAGRIRGLLSRLN-- 451
                 :|||:.:|.|.||..:.::|    |..|...|    :....:.|.....:|.|:.||.
plant  1087 -----VGGAMMTGVREAVRIIDILR----SGNDYTAEIETLEKAQRKSVPVRDEVRDLIKRLEVV 1142

  Fly   452 -----------LYNVTFYSFFVIGLIW----LLNL 471
                       |.|:.|.:...:|.:.    ||||
plant  1143 ELSNVLARQSLLRNMFFSAKTTVGRLHLAKELLNL 1177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shps	NP_651239.1	YobN	9..409	CDD:440844	92/535 (17%)
LDL3	NP_193364.5	PLN02976	1..1628	CDD:215527	111/620 (18%)