DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and PAO3

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_191464.1 Gene:PAO3 / 825074 AraportID:AT3G59050 Length:488 Species:Arabidopsis thaliana


Alignment Length:510 Identity:83/510 - (16%)
Similarity:171/510 - (33%) Gaps:199/510 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQN----------STRLVDAAQQDML 68
            |:::|||::|:::|..:  .:::.:|.::|:.|.:||.:..:          ::.|....:::.|
plant    31 VIVIGGGMAGISAARTL--QDASFQVVVLESRDRIGGRVHTDYSFGFPVDLGASWLHGVCKENPL 93

  Fly    69 ALLTLIHLSPRRRRSISGSLRRCWDLDRGLTAMPAKFELGRYIDMLDLRMPKFRS---------- 123
            |.:                                   :||      |.:|.:|:          
plant    94 AAV-----------------------------------IGR------LGLPLYRTSGDNSVLYDH 117

  Fly   124 --KRFNLRERVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVFMSVCSSC------- 179
              :.:.|.::..|   .:...|......||. ::::.:|.| .:|.|.|:.::...|.       
plant   118 DLESYALFDKAGN---QVSQELVTKVGENFE-HILEEICKV-RDEQDEDMSIAQAFSIVFKRNPE 177

  Fly   180 ----GGLKVLIDFYFTYPTSFYEISTQMLIENILEQLQFI-----------KIILNCRA----VR 225
                |....::.:|......::....:.:.....:|.:.:           :.::|..:    :|
plant   178 LRLEGLAHNVLQWYLCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLSKGLDIR 242

  Fly   226 LEH-----FKNY--VQVTDDQGNKHTAQAAILAIPWN--KVQKLHFEPRIPKVFLPRTTSRSGRK 281
            |.|     .:.|  |:||.::|:...|.||::|:|..  |...:.|||::|:    .........
plant   243 LSHRITKISRRYSGVKVTTEKGDTFVADAAVIALPLGVLKSGMITFEPKLPQ----WKQEAINDL 303

  Fly   282 GRQVISQFQLRYGKSVWTDLGYSGNFLSSQPMVSGHECRMSSFCGYVLHL------------PED 334
            |..:.::..|.:....|.::.:.|....:           |..|.|.|:|            |..
plant   304 GVGIENKIILNFDNVFWPNVEFLGVVAET-----------SYGCSYFLNLHKATSHPVLVYMPAG 357

  Fly   335 Q---------DE------------VLQDV---VDLLAEHFG---------------------EEM 354
            |         ||            :|.|.   ::.|...:|                     |.:
plant   358 QLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSDINSLGSYSYDIVNKPHDLYERL 422

  Fly   355 RQPLECQCFTDELNVAQHKPQTKPWHRVIWSSSSAVGTSYRSLMGGAVQSGFRAA 409
            |.||:...|..|                      |..:||...:.||..:|..||
plant   423 RVPLDNLFFAGE----------------------ATSSSYPGSVHGAYSTGVLAA 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 81/508 (16%)
PAO3NP_191464.1 PLN02268 29..463 CDD:177909 83/510 (16%)

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