DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and FLD

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001326314.1 Gene:FLD / 820202 AraportID:AT3G10390 Length:936 Species:Arabidopsis thaliana


Alignment Length:493 Identity:99/493 - (20%)
Similarity:165/493 - (33%) Gaps:138/493 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FGTQTPELDVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTRLVDAAQQDMLA 69
            |..|:.:..|:|||.||||||:|.::  |....||.::|.....||.:   .|:.::|.:....|
plant   230 FPAQSSKSSVIIVGAGLSGLAAARQL--MRFGFKVTVLEGRKRPGGRV---YTKKMEANRVGAAA 289

  Fly    70 LL-------TLIHLSPRRRRSISGSLRRCWDLDRGLTAMPAKFELGRYID-----MLDLRMPKFR 122
            .|       ||.:......|.:..||.:..|      ..|.....|:.:|     .:::...:..
plant   290 DLGGSVLTGTLGNPLGIIARQLGSSLYKVRD------KCPLYRVDGKPVDPDVDIKVEVAFNQLL 348

  Fly   123 SKRFNLRERVSNMEQHI----CHHLFFSKSRN------------FMLNLVQLVCGVPA------- 164
            .|...||:.:.::...:    ....|...|.|            .:.||.....|:.:       
plant   349 DKASKLRQLMGDVSMDVSLGAALETFRQVSGNDVATEEMGLFNWHLANLEYANAGLVSKLSLAFW 413

  Fly   165 -NEVDYDVFMSVCSSCGGLKVLIDFYFTYPTSFYEISTQMLIENILEQLQFIKIILNCRAVRLEH 228
             .:..||:....|...||...|:               |.|.||       :.|:.......:.:
plant   414 DQDDPYDMGGDHCFLPGGNGRLV---------------QALAEN-------VPILYEKTVQTIRY 456

  Fly   229 FKNYVQVTDDQGNK-HTAQAAILAIPWN--KVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQFQ 290
            ..|.|:||  .||: :.....:..:|..  |...:.|.|.:|:    |......|.|..::::..
plant   457 GSNGVKVT--AGNQVYEGDMVLCTVPLGVLKNGSIKFVPELPQ----RKLDCIKRLGFGLLNKVA 515

  Fly   291 LRYGKSVW-TDL----------GYSGNF--LSSQPMVSGHECRMSSFCGYVLHL-----PEDQDE 337
            :.:....| |||          .|.|.|  ..|...|:|....::...|...|.     |.|...
plant   516 MLFPYVFWSTDLDTFGHLTEDPNYRGEFFLFYSYAPVAGGALLIALVAGEAAHKFETMPPTDAVT 580

  Fly   338 VLQDVVDLLAEHFGEEMRQPLECQCFT---DELNVAQHKPQTKPWHRVIWSSSSAVGTS------ 393
            .:..::..:.|..|..:..||:..|..   |..::..:             |:.|||.|      
plant   581 RVLHILRGIYEPQGINVPDPLQTVCTRWGGDPFSLGSY-------------SNVAVGASGDDYDI 632

  Fly   394 --------------------YRSLMGGAVQSGFRAAVN 411
                                |.:.|.||..:|.|.|.|
plant   633 LAESVGDGRLFFAGEATTRRYPATMHGAFVTGLREAAN 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 95/485 (20%)
FLDNP_001326314.1 PLN03000 53..936 CDD:178578 99/493 (20%)

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