DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shps and PAO2

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_181830.1 Gene:PAO2 / 818904 AraportID:AT2G43020 Length:490 Species:Arabidopsis thaliana


Alignment Length:537 Identity:96/537 - (17%)
Similarity:196/537 - (36%) Gaps:164/537 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TQTPELDVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQN----------STRLVD 61
            |::|  .|:::|||..|:::|..:  .:::.:|.::|:.|.:||.:..:          ::.|..
plant    25 TRSP--SVIVIGGGFGGISAARTL--QDASFQVMVLESRDRIGGRVHTDYSFGFPVDLGASWLHG 85

  Fly    62 AAQQDMLA-LLTLIHLSPRRRRSISGSL--------RRCWDLDRGLTAMPAKFELGRYIDMLDLR 117
            ..:::.|| ::..:.| |..|.|...|:        ...:|:|..........::|...:.:...
plant    86 VCKENPLAPVIGRLGL-PLYRTSGDNSVLYDHDLESYALFDMDGNQVPQELVTQIGVTFERILEE 149

  Fly   118 MPKFRSKRFNLRERVSNMEQHICHHLFFSKSRNFML-----NLVQ-LVC---GVPANEVDYDVFM 173
            :.|.|.      |:.:::.......:.||:.....|     |::| .||   |..|.:.:     
plant   150 INKVRD------EQDADISISQAFSIVFSRKPELRLEGLAHNVLQWYVCRMEGWFAADAE----- 203

  Fly   174 SVCSSC--------GGLKVLIDFYFTYPTSFYEISTQMLIENILEQLQFIKIILNCRAVRLEHFK 230
            ::.:.|        ||..:::..|            :.:|..:.:.|.   |.:..|..::....
plant   204 TISAKCWDQEELLPGGHGLMVRGY------------RPVINTLAKGLD---IRVGHRVTKIVRRY 253

  Fly   231 NYVQVTDDQGNKHTAQAAILAIPWN--KVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQFQLRY 293
            |.|:||.:.|....|.||::|:|..  |...:.|||::|:    .........|..:.::..|.:
plant   254 NGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPE----WKQEAINDLGVGIENKIILHF 314

  Fly   294 GKSVW---------TDLGYSGNFLSSQPMVSGHECRMSSFCGYVLHLPEDQ---------DE--- 337
            .|..|         .:..|..::..:....:||.        .::::|..|         ||   
plant   315 EKVFWPKVEFLGVVAETSYGCSYFLNLHKATGHP--------VLVYMPAGQLAKDIEKMSDEAAA 371

  Fly   338 ---------VLQDV---VDLLAEHFG---------------------EEMRQPLECQCFTDELNV 369
                     :|.|.   |..|...:|                     |.:|.|::...|..|   
plant   372 NFAVLQLQRILPDALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLFFAGE--- 433

  Fly   370 AQHKPQTKPWHRVIWSSSSAVGTSYRSLMGGAVQSGFRAAVNAVFVVRPQVVS-WKDMLVEQPKN 433
                               |..:|:...:.||..:|..||.:.    |.:|:. :.::.:.||..
plant   434 -------------------ATSSSFPGSVHGAYSTGLMAAEDC----RMRVLERYGELDLFQPVM 475

  Fly   434 GQDVVSAGRIRGLLSRL 450
            |::  ....:..|:|||
plant   476 GEE--GPASVPLLISRL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 84/491 (17%)
PAO2NP_181830.1 PLN02268 41..462 CDD:177909 81/487 (17%)

Return to query results.
Submit another query.