DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shps and 4930438A08Rik

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001361634.1 Gene:4930438A08Rik / 73988 MGIID:1921238 Length:536 Species:Mus musculus


Alignment Length:547 Identity:108/547 - (19%)
Similarity:191/547 - (34%) Gaps:178/547 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QTPE-LDVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTRLVDAAQQ--DMLA 69
            ||.| ..|:::|.|::||.:| ||| .::..:|.::|||..:||.:   .|..|..|..  ::.|
Mouse    57 QTAERKQVVVIGAGMAGLTAA-KIL-QDAGHQVTVLEASGRVGGRI---ETHRVPGAHWYIELGA 116

  Fly    70 L-----------------LTLIHLSPRRRRS---ISGSLRR--CWDLDRGLTAMPAKF-ELGRYI 111
            :                 |.|....|...::   ::|..:|  ....|.||.....:. |:|:..
Mouse   117 MRIPINHRLSHELIKKFGLMLKEFCPCNNQTWVLVNGVRQRSGAVQADPGLLGYSVRADEVGKTA 181

  Fly   112 DMLDLRMPKFRSKRFNLRERVSNMEQHICHHLF-----FSKSRNFMLNLVQLVCGVPANEVDYDV 171
            :.|      |.:   :||:.|..::...|..:.     || ::.:::.:..|             
Mouse   182 EQL------FDA---SLRKIVEELKNSSCQEVLEKYDSFS-TKEYLIKVGNL------------- 223

  Fly   172 FMSVCSSCGGLKVLIDFYFTYPTSFYEISTQML--IENILEQLQFIKIILNCRAVRLEHFKNYVQ 234
                  |.|.::::.|...| .:.:||..|:.|  |.:..:..:|.:|:           ..:.|
Mouse   224 ------SRGAVQMIGDMLNT-DSGYYEAFTETLRGIISFFQDPRFDEIV-----------GGFDQ 270

  Fly   235 VTDDQGNKHTAQAAILAIPWNKVQK----LHFEPRIPKVFLPR-----------TTSRSGRKGRQ 284
            :.....|...........|..:|:.    :|...|.|...|||           ||:::.|    
Mouse   271 LPQALHNSLLPGTVWFYSPAEEVEMSGDCVHVTYRTPDPLLPRARLTADFVVVATTAKAAR---- 331

  Fly   285 VISQFQ-------------LRYGKSVWTDLGYSGNFLSSQPMVSGHEC--RMSSFCGYVLHL-PE 333
             :.:||             :.|..:....|..:..|.....:.||...  |.|.|..|..|: |.
Mouse   332 -LLRFQPPLSLNKQDALRSVHYNSATKVILACTQRFWERDGIFSGKSSTDRPSRFIYYPNHIFPN 395

  Fly   334 -----------DQDEV---------LQDVV--DLLAEHFGEEMRQPLECQC-------------- 362
                       |.|.|         :.|:|  ||.|.|  ...::.|...|              
Mouse   396 GAGVILASYTLDDDSVFFTALDHTQVVDIVLDDLAALH--SRAKEELRALCPYSAIKNWSQDPYS 458

  Fly   363 ------FTDELNVAQHKPQTKPWHRVIWSSSSAVGTSYRSLMGG----AVQSGFRAAVNAVFVVR 417
                  ||....|...:..::|...|.::.      .:..|..|    |::||.|.|.|    ::
Mouse   459 MGGFAFFTPYQYVDYAQELSQPEGLVFFAG------EHTDLPHGWIDTAIKSGLRVAKN----IQ 513

  Fly   418 PQVVSWKDM-LVEQPKNGQDVVSAGRI 443
            ..|    |: |...|:|.::..|...:
Mouse   514 ESV----DLALTRNPRNTKEYFSKSEL 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 99/509 (19%)
4930438A08RikNP_001361634.1 YobN 55..512 CDD:440844 102/517 (20%)

Return to query results.
Submit another query.