DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and shps

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_001237214.3 Gene:shps / 4577573 VectorBaseID:AGAMI1_012186 Length:525 Species:Anopheles gambiae


Alignment Length:500 Identity:115/500 - (23%)
Similarity:203/500 - (40%) Gaps:73/500 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LDVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTRLVDAAQQDMLALL----- 71
            ||:.|||.|:|||.:|..|....:.::.|:.|.|...||.:....||.:.......:.|.     
Mosquito    28 LDLAIVGAGISGLMAAKTISEKRADIRFRLFEKSTHPGGTLDGLKTRWITPHHYHAMNLCRELQI 92

  Fly    72 ----------------TLIHLSPRRRR--------SISGSLRRCWDLDRGLTAMPAKFELGRYID 112
                            :|:.:.|.|:|        |...|||   ||       ..:.|..|::.
Mosquito    93 PLGTVWRQSETSEARRSLVSIGPFRKRPSGSQGANSFMSSLR---DL-------LVRLESTRFMT 147

  Fly   113 MLD-LRMPKFRSKRFNLRERVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVFMSVC 176
            .|| |...|:      :.....|||..:...|.|..||.|...|:::..|...:|:.....:.:.
Mosquito   148 ELDCLCTVKY------IESNAQNMECFLQRKLLFEASRRFYRFLIKIGTGFYPSELTVAACLRLF 206

  Fly   177 SSCGGLKVLIDFYFTYPTSFYE----ISTQMLIENILEQLQFIKIILNCRAVRLE----HFKNYV 233
            .|...::.|.|. .|......:    .:..:|||.::.::....:..:...|::|    .....|
Mosquito   207 RSMSSVRDLYDM-LTLQNGHLQPAGSPNWDVLIERLVARVGPEHVTYSTNIVQVEISSDQRSEIV 270

  Fly   234 QVTDDQGNKHTAQAAILAIPWNKVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQFQLRYGKSVW 298
            .:||..|.:..|:..|||:....:.::...|..|..|    .....:.|...::.|.:||....|
Mosquito   271 SLTDGTGRRWRARFVILAVSCLDLVQISILPEGPLYF----HQPDIQLGLWSMANFTVRYPAPYW 331

  Fly   299 TDLGYSGNFLSSQPMVSGHECRMSSFCGYVLH-----LPEDQDEVLQD-VVDLLAEHFG-EEMRQ 356
            .|.||:|:.......:..:|...:...|....     |.:.:..:::| ::.||..:|. ..|::
Mosquito   332 RDHGYTGSIFCPAQCLICYESGRNQLSGTYFSPLRGVLNDTERHLIRDTILRLLRTNFACRTMQK 396

  Fly   357 PLECQCFTDELNVAQHKPQTKP-WHRVIWSSSSAVGTSYRSLMGGAVQSGFRAAVNAVFVVRPQV 420
            |||   |..||:.........| :.|.|..||:.|...||..:.|::|.|.|||:.|:..:|||.
Mosquito   397 PLE---FGLELHPIPFYFDVFPTFERCIIFSSTNVSCWYRGFINGSIQGGVRAAILALLEIRPQT 458

  Fly   421 VSWKDMLVEQPKNGQDVVSAGRIRGLLSRLNLYNVTFYSFFVIGL 465
            ::::::...|..:.:..........:...|||.:|   |.|::|:
Mosquito   459 ITFREVTDMQCMHFKYFRQRSSYERVWYSLNLASV---SRFLLGV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 101/442 (23%)
shpsXP_001237214.3 None

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