DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and CG5653

DIOPT Version :9

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster


Alignment Length:508 Identity:101/508 - (19%)
Similarity:176/508 - (34%) Gaps:167/508 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLIVGGGLSGLASALKILAMESTLKVRMIEASDALGG-----LMGQNSTRLVDAAQQ-------- 65
            ::|:|.|:||:|:|.::| ..:...|:::||.|.:||     ..|.|   ::|...|        
  Fly    10 IIIIGAGVSGIAAATRLL-QNNFQNVQILEAEDRIGGRINTVYFGDN---VIDLGAQWCHGKQQN 70

  Fly    66 ---DMLALLTLIH-----LSP----RRRRSISGSLRRCWDLDRGLTAMPA-----KFELGRYIDM 113
               ||:..:.::|     .||    |..:.:......|...|..:.:||:     ....|.::..
  Fly    71 CVYDMVKDMGILHETGDYYSPIKRVRSNKEVVPHELACRIHDIAVKSMPSGPHPVVGSFGTHLTQ 135

  Fly   114 LDLRMPKFRSKRFNLRERVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVFMSVCSS 178
            ...|  |..|:...:...|::...:.     |:|..:.::....|........::|       ..
  Fly   136 TFWR--KIESELPQVNRDVASEALNT-----FAKHESSIIGADNLFEVSVREHIEY-------HE 186

  Fly   179 CGGLKVLIDFYFTYPTSFYEISTQMLIE---------NILE-----QLQFIKIILNC-RAVRLEH 228
            |.|.|:|     .:.|..|....::|::         .:||     .::.|||.|.| |.|.|. 
  Fly   187 CDGDKLL-----HWGTKGYRRFLRLLMKVSADTPEELGLLEGRIQLDMKVIKIELACPRKVILR- 245

  Fly   229 FKNYVQVTDDQGNKHTAQAAILAIPWNKVQKLH---FEPRIP--KVFLPRTTSRSGRKGRQVISQ 288
                    ...|:...|...|..:....:|:.|   |.|.:|  ||...|:.:..      .:::
  Fly   246 --------CQDGDYFEADHVICTVSLGVLQEQHEKLFVPPLPAAKVNAIRSLTLG------TVNK 296

  Fly   289 FQLRYGKSVWTDLGYSGNF---------------------------LSSQP-----MVSGHECRM 321
            ..|.|.|....| |:.|.|                           ::.||     .|:|...| 
  Fly   297 LYLEYEKQPLPD-GWVGFFCFWLEEDLIELRKTEYFWVEGITGVHMITCQPRMLMAWVNGPHGR- 359

  Fly   322 SSFCGYVLHLPEDQDE-VLQDVVDLLAEHFGEEMRQP---LECQCFT---------------DEL 367
                    |:....|| ||:.:..|..:....|:..|   :....|:               ||.
  Fly   360 --------HMETLSDEKVLEGLYWLFRKFLTFEIPPPKRFVRSSWFSNPNFRGSWSYRGVMADER 416

  Fly   368 NVAQHKPQTKPW-----------HRVIWSSSSAVGTSYRSLMGGAVQSGFRAA 409
            |       |.||           |..:..:..|...::.|.:.|||::|:|.|
  Fly   417 N-------TGPWDLESPVLGEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREA 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 NADB_Rossmann 11..>53 CDD:304358 14/43 (33%)
Amino_oxidase 21..409 CDD:279874 97/499 (19%)
CG5653NP_648269.1 NAD_binding_8 12..78 CDD:290186 20/69 (29%)
Amino_oxidase 17..466 CDD:279874 98/501 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452793
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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