DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and CG10561

DIOPT Version :9

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_476608.1 Gene:CG10561 / 35189 FlyBaseID:FBgn0002036 Length:504 Species:Drosophila melanogaster


Alignment Length:475 Identity:98/475 - (20%)
Similarity:171/475 - (36%) Gaps:136/475 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QTPELD-------VLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTRL------ 59
            ::|:|:       :::||.||:||::|..:|: ....:..::||:|..||.:  |:.|.      
  Fly    28 RSPDLEAARQNTQIVVVGAGLAGLSAAQHLLS-HGFRRTVILEATDRYGGRI--NTQRFGDTYCE 89

  Fly    60 -------VDAAQQDMLALLTLIHLSPRRRRSISGSLR---RCWDLDRGLTAMPAKFELGRYIDML 114
                   :|.:|..|..||       |....:...::   |...|..|....||..||   ||.|
  Fly    90 LGAKWVKIDGSQDSMYELL-------RNTEGLGKQIKQPDRATYLQDGSRINPAMVEL---IDTL 144

  Fly   115 DLRMPKFRS--KRFNLRERV-SNMEQHICHHLFFSKSRNFMLNLVQLVCGV----PANEV-DYDV 171
                  ||.  :.|.:.||| :..:.|...::.     |:.......:.||    |.::: ..::
  Fly   145 ------FRQLCRGFKVSERVKTGGDLHSLDNVM-----NYFRTESDRIIGVSFQHPKDQLAAREI 198

  Fly   172 FMSVCSSCGGL------KVLIDFYFTYPTSFYE--ISTQMLIENILEQLQFIKIILNCRAVRLEH 228
            |.|:....|.:      .|.|:.....|....:  :.....::|:::.|     |.|....:|:.
  Fly   199 FQSLFKEFGSILGCCLEYVNIEHITKCPVQQEQRPLYVPTGLDNVVDDL-----IQNMDKAQLQT 258

  Fly   229 FK--NYVQVTDD--------QGNKHTAQAAILAIPWNKVQK---LHFEPRIP--KVFLPRTTSRS 278
            .|  ..:|.|..        .|:.:.|...|..:|...::.   :.|.|.:|  |:...|...  
  Fly   259 GKPVGQIQWTPAPMKSVGCLDGSLYNADHIICTLPLGVLKSFAGVLFRPTLPLDKMLAIRNLG-- 321

  Fly   279 GRKGRQVISQFQLRYGKSV--WT--DLGYSGNFLS------------------SQPMVSGHECRM 321
              .|..:  :..|.|.|.:  |.  .|...|..|:                  ||...|.|...:
  Fly   322 --FGNPL--KIYLSYKKPIGRWLKGSLRPLGTLLNPSVEQQPERNWTQQVVEISQVPSSQHVLEV 382

  Fly   322 SSFCGY---VLHLPEDQDEVLQDVVDLLAEHFGEEMRQPLECQCFTDELNVAQHKPQTKPWHRVI 383
            ....||   :..||:  :|:|:.:..||.             :|.:..|     .|..:...|..
  Fly   383 HVGGGYYEEIEKLPD--EELLEQITGLLR-------------RCVSSHL-----VPYPQELLRSN 427

  Fly   384 WSSSSAV--GTSYRSLMGGA 401
            ||:|:..  |..|.|....|
  Fly   428 WSTSACYLGGRPYFSTNSSA 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 NADB_Rossmann 11..>53 CDD:304358 14/48 (29%)
Amino_oxidase 21..409 CDD:279874 93/455 (20%)
CG10561NP_476608.1 NAD_binding_8 43..109 CDD:290186 20/75 (27%)
Amino_oxidase 48..494 CDD:279874 93/455 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452809
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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