DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and Maoa

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_387502.1 Gene:Maoa / 29253 RGDID:61898 Length:526 Species:Rattus norvegicus


Alignment Length:531 Identity:113/531 - (21%)
Similarity:208/531 - (39%) Gaps:135/531 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGG------------------LMGQNSTRL 59
            ||:::|||:||||:| |:|: |..:.|.::||.|.:||                  .:|....|:
  Rat    15 DVVVIGGGISGLAAA-KLLS-EYKINVLVLEARDRVGGRTYTVRNEHVKWVDVGGAYVGPTQNRI 77

  Fly    60 VDAAQQDMLALLT--------LIHLSPRRRRSISGSLRRCWD----LDRGLTAMPAKFELGRYID 112
            :..:::  |.:.|        |:.....:.....|:....|:    ||..        .|.|.:|
  Rat    78 LRLSKE--LGIETYKVNVNERLVQYVKGKTYPFRGAFPPVWNPLAYLDYN--------NLWRTMD 132

  Fly   113 MLDLRMP---KFRSKRFNLRERVS--NMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVF 172
            .:...:|   .::::.....::::  ::...||   :...:|.|....|.:......:||....|
  Rat   133 EMGKEIPVDAPWQARHAQEWDKMTMKDLIDKIC---WTKTAREFAYLFVNINVTSEPHEVSALWF 194

  Fly   173 MSVCSSCGGLKVLIDFYFT-------YPTSFYEISTQMLIENILEQLQFIKIILNCRAVRLEHFK 230
            :.....|||...:  |..|       :.....::|.|::  .:|..           .|:|....
  Rat   195 LWYVRQCGGTARI--FSVTNGGQERKFVGGSGQVSEQIM--GLLGD-----------KVKLSSPV 244

  Fly   231 NYVQVTDDQ------GNKH-TAQAAILAIPWNKVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQ 288
            .|:..|||.      .::| ..:..|.|||.....|:||:|.:|    |.......|.....:.:
  Rat   245 TYIDQTDDNIIVETLNHEHYECKYVISAIPPILTAKIHFKPELP----PERNQLIQRLPMGAVIK 305

  Fly   289 FQLRYGKSVWTDLGYSGNFL---SSQPMV-----SGHECRMSSFCGYVLHLPED------QDEVL 339
            ..:.|.::.|....|.|..:   ...|:.     :..:..:.:..|::|....|      :|...
  Rat   306 CMVYYKEAFWKKKDYCGCMIIEDEEAPIAITLDDTKPDGSLPAIMGFILARKADRLAKLHKDIRK 370

  Fly   340 QDVVDLLAEHFG-EEMRQPLE------CQ------CFTDELNVAQHKP--QTKPWHRV------- 382
            :.:.:|.|:..| :|...|:.      |:      |:|     |...|  .|: :.||       
  Rat   371 RKICELYAKVLGSQEALYPVHYEEKNWCEEQYSGGCYT-----AYFPPGIMTQ-YGRVIRQPVGR 429

  Fly   383 IWSSSSAVGTSYRSLMGGAVQSGFRAA---VNAVFVVRPQVVSWKDMLVEQPKNGQDVVSAGRIR 444
            |:.:.:...|.:...|.|||::|.|||   :||:     ..|:.||:.||:|:: :||.:.....
  Rat   430 IYFAGTETATQWSGYMEGAVEAGERAAREVLNAL-----GKVAKKDIWVEEPES-KDVPAIEITH 488

  Fly   445 GLLSRLNLYNV 455
            ..|.| ||.:|
  Rat   489 TFLER-NLPSV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 96/480 (20%)
MaoaNP_387502.1 YobN 11..464 CDD:440844 100/493 (20%)
Interaction with membrane phospholipid headgroups. /evidence=ECO:0000250 520..522
Blue background indicates that the domain is not in the aligned region.

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