DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and Maob

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_037330.1 Gene:Maob / 25750 RGDID:3041 Length:520 Species:Rattus norvegicus


Alignment Length:557 Identity:115/557 - (20%)
Similarity:197/557 - (35%) Gaps:162/557 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGG------------------LMGQNSTRL 59
            ||::||||:||:|:| |:| .:..|.|.::||.|.:||                  .:|....|:
  Rat     6 DVIVVGGGISGMAAA-KLL-HDCGLSVVVLEARDCVGGRTYTIRNKNVKYVDLGGSYVGPTQNRI 68

  Fly    60 VDAAQQDMLALLT--------LIHLSPRRRRSISGSLRRCWDLDRGLTAMPAKF----ELGRYID 112
            :..|::  |.|.|        |||....:..:..|.....|:        |..:    .|.|.:|
  Rat    69 LRLAKE--LGLETYKVNEVERLIHFVKGKSYAFRGPFPPVWN--------PITYLDYNNLWRTMD 123

  Fly   113 MLDLRMPKFRSKRFNLRER-----VSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVDYDVF 172
            .:...:|.....:..|.|.     :..:...||   :.:.::......|.|......:||....|
  Rat   124 EMGQEIPSDAPWKAPLAEEWDYMTMKELLDKIC---WTNSTKQIATLFVNLCVTAETHEVSALWF 185

  Fly   173 MSVCSSCGGLKVLIDFYFTYPTSFYEIST------QMLIENILEQLQFIKIILNCRAVRLEHFKN 231
            :.....|||...:             |||      :..|....:..:.||.||..| |:||....
  Rat   186 LWYVKQCGGTTRI-------------ISTTNGGQERKFIGGSGQVSERIKDILGDR-VKLERPVI 236

  Fly   232 YVQVTDD-------QGNKHTAQAAILAIPWNKVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQF 289
            ::..|.:       ....:.|:..|.|||.....|:|..|.:|.:            ..|:|::.
  Rat   237 HIDQTGENVVVKTLNHEIYEAKYVISAIPPVLGMKIHHSPPLPIL------------RNQLITRV 289

  Fly   290 QL--------RYGKSVWTDLGYSGNFLSSQPMVSGHECRM-------------SSFCGYVL-HLP 332
            .|        .|.:..|....:.|..     ::.|.|..:             ::..|::| |..
  Rat   290 PLGSVIKCMVYYKEPFWRKKDFCGTM-----VIEGEEAPIAYTLDDTKPDAGCAAIMGFILAHKA 349

  Fly   333 E-----DQDEVLQDVVDLLAEHF-GEEMRQPLE------CQ------CFT--------DELNVAQ 371
            .     .::|.|:.:.:|.|:.. .:|..||:.      |:      |:|        .:.....
  Rat   350 RKLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTAYFPPGILTQYGRVL 414

  Fly   372 HKPQTKPWHRVIWSSSSAVGTSYRSLMGGAVQSGFRAAVNAVFVVR--PQVVSWKDMLVEQPKNG 434
            .:|..|     |:.:.:...:.:...|.|||::|.|||...:..:.  |:...|      ||:..
  Rat   415 RQPVGK-----IFFAGTETASHWSGYMEGAVEAGERAAREILHAIGKIPEDEIW------QPEPE 468

  Fly   435 QDVVSAGRIRGLLSRLNLYNVTFYSFFVIGLIWLLNL 471
            ...|.|..|.......:|.:|.       ||:.||.|
  Rat   469 SVDVPARPITNTFLERHLPSVP-------GLLKLLGL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 99/491 (20%)
MaobNP_037330.1 YobN 2..455 CDD:440844 101/499 (20%)

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